RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 UBXN1Q04323 297 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 TSTA3Q13630 321 aaPredicted RBP1.22□□□□□ -2.21
SNORA28-201ENST00000606769 CD226Q15762 336 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 HKDC1Q2TB90 917 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 LRIT3Q3SXY7 679 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 KRT71Q3SY84 523 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 AGKQ53H12 422 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 VWA2Q5GFL6 755 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 LIPKQ5VXJ0 399 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 RTL6Q6ICC9 239 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 CGB2Q6NT52 195 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 ARMCX5Q6P1M9 558 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 ATRAIDQ6UW56 229 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 WDR88Q6ZMY6 472 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 Q6ZR54 194 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 MOB2Q70IA6 237 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 YRDCQ86U90 279 aaKnown RBP1.22□□□□□ -2.21
SNORA28-201ENST00000606769 CATSPER3Q86XQ3 398 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 HIPK1Q86Z02 1210 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 LRRC49Q8IUZ0 686 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 ELMOD2Q8IZ81 293 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 LINC00518Q8N0U6 118 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 SAMD12Q8N8I0 201 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 MINDY2Q8NBR6 621 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 OR4F17Q8NGA8 305 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 GTSF1Q8WW33 167 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 SLC13A3Q8WWT9 602 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 TCP11Q8WWU5 503 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 TMEM45BQ96B21 275 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 TMEM186Q96B77 213 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 BIRC7Q96CA5 298 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 RPGRIP1Q96KN7 1286 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 DEFB118Q96PH6 123 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 OR4F4Q96R69 305 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 CPXM1Q96SM3 734 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 COQ7Q99807 217 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 GPR174Q9BXC1 333 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 UBXN6Q9BZV1 441 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 ZBP1Q9H171 429 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 THAP9Q9H5L6 903 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 SYTL2Q9HCH5 934 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 UBE2TQ9NPD8 197 aaPredicted RBP1.22□□□□□ -2.21
SNORA28-201ENST00000606769 SLC7A10Q9NS82 523 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 PRR34Q9NV39 138 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 TAS2R16Q9NYV7 291 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 NINJ2Q9NZG7 142 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 CNOT2Q9NZN8 540 aaKnown RBP1.22□□□□□ -2.21
SNORA28-201ENST00000606769 LHX3Q9UBR4 397 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 Q9UF83 564 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 MIOXQ9UGB7 285 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 IL19Q9UHD0 177 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 IL20RAQ9UHF4 553 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 FAM153AQ9UHL3 310 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 TEKT2Q9UIF3 430 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 EMCNQ9ULC0 261 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 RNF24Q9Y225 148 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 NUDCQ9Y266 331 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 MRPL11Q9Y3B7 192 aaKnown RBP1.22□□□□□ -2.21
SNORA28-201ENST00000606769 KNSTRNQ9Y448 316 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 ZNF175Q9Y473 711 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 CPQQ9Y646 472 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 SYNJ2O15056 1496 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 ADAMTS9Q9P2N4 1935 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 POGZQ7Z3K3 1410 aa1.22□□□□□ -2.21
SNORA28-201ENST00000606769 TP53BP1Q12888 1972 aaPredicted RBP1.21□□□□□ -2.22
SNORA28-201ENST00000606769 SPAG9O60271 1321 aaKnown RBP1.21□□□□□ -2.22
SNORA28-201ENST00000606769 IGHV3OR16-12A0A075B7B8 117 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 TRAV9-2A0A087WT02 112 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 TRBV2A0A0J9YWF9 115 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 RNF222A6NCQ9 220 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 RNF212BA8MTL3 300 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 H3BMH7 237 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 PDLIM1O00151 329 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 EEF2KO00418 725 aaKnown RBP1.21□□□□□ -2.22
SNORA28-201ENST00000606769 CDX4O14627 284 aaPredicted RBP1.21□□□□□ -2.22
SNORA28-201ENST00000606769 MCF2LO15068 1137 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 ARPC1BO15143 372 aaKnown RBP1.21□□□□□ -2.22
SNORA28-201ENST00000606769 LATO43561 262 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 ZBTB14O43829 449 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 GPRIN2O60269 458 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 RANBP6O60518 1105 aaKnown RBP1.21□□□□□ -2.22
SNORA28-201ENST00000606769 SRPX2O60687 465 aaPredicted RBP1.21□□□□□ -2.22
SNORA28-201ENST00000606769 STK17BO94768 372 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 KBTBD11O94819 623 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 PTBP3O95758 552 aaKnown RBP1.21□□□□□ -2.22
SNORA28-201ENST00000606769 PDGFBP01127 241 aaPredicted RBP1.21□□□□□ -2.22
SNORA28-201ENST00000606769 PIGRP01833 764 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 SLC4A1P02730 911 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 ALPPP05187 535 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 PGK2P07205 417 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 SFTPBP07988 381 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 FCGR3AP08637 254 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 GSTA2P09210 222 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 HOXB7P09629 217 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 ALPPL2P10696 532 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 HLA-DPA1P20036 260 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 IGFBP5P24593 272 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 RPA1P27694 616 aa1.21□□□□□ -2.22
SNORA28-201ENST00000606769 STIP1P31948 543 aaKnown RBP1.21□□□□□ -2.22
SNORA28-201ENST00000606769 CHRNA3P32297 505 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms