RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 OR5P2Q8WZ92 322 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 GTF2H4Q92759 462 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 NCLNQ969V3 563 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 RBM18Q96H35 190 aaKnown RBP7.16□□□□□ -1.26
MSH6-211ENST00000606499 SENP5Q96HI0 755 aaPredicted RBP7.16□□□□□ -1.26
MSH6-211ENST00000606499 FBXL20Q96IG2 436 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 MAGED4Q96JG8 741 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 IMMP1LQ96LU5 166 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 CCDC115Q96NT0 180 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 PANX1Q96RD7 426 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 LPAR4Q99677 370 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 NPAS2Q99743 824 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 SLC25A23Q9BV35 468 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 TRIM4Q9C037 500 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 MRGBPQ9NV56 204 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 TMEM45AQ9NWC5 275 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 TAS2R9Q9NYW1 312 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 BTNL2Q9UIR0 455 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 ZNF223Q9UK11 482 aaPredicted RBP7.16□□□□□ -1.26
MSH6-211ENST00000606499 SNX8Q9Y5X2 465 aa7.16□□□□□ -1.26
MSH6-211ENST00000606499 SPENQ96T58 3664 aaKnown RBP7.16□□□□□ -1.26
MSH6-211ENST00000606499 CPAMD8Q8IZJ3 1885 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 SEC16AO15027 2179 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 A0A087WV48 116 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 RNF103-CHMP3A0A140T963 221 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 A0A1W2PP18 115 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 TMEM8BA6NDV4 472 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 ARGFXA6NJG6 315 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 UPK1AO00322 258 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 PEX12O00623 359 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 RFXANKO14593 260 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 MRASO14807 208 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 DYRK3O43781 588 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 HPP00738 406 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 IGKV3-11P04433 115 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 HOXB9P17482 250 aaPredicted RBP7.15□□□□□ -1.26
MSH6-211ENST00000606499 S1PR1P21453 382 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 PTPN6P29350 595 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 ADSLP30566 484 aaPredicted RBP7.15□□□□□ -1.26
MSH6-211ENST00000606499 GALNSP34059 522 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 PRKAG1P54619 331 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 SLC37A1P57057 533 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 MAP4K2Q12851 820 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 CYLC2Q14093 348 aaPredicted RBP7.15□□□□□ -1.26
MSH6-211ENST00000606499 TERF2Q15554 542 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 MAPRE2Q15555 327 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 SPDYE7PQ495Y7 208 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 GTDC1Q4AE62 458 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 DCAF10Q5QP82 559 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 BROXQ5VW32 411 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 FAM91A1Q658Y4 838 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 REP15Q6BDI9 236 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 PLAG1Q6DJT9 500 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 LRRC69Q6ZNQ3 347 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 MSANTD1Q6ZTZ1 278 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 NDUFAF7Q7L592 441 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 NATD1Q8N6N6 113 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 ZNF615Q8N8J6 731 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 APCDD1LQ8NCL9 501 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 MORN4Q8NDC4 146 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 VPS37AQ8NEZ2 397 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 B3GNT7Q8NFL0 401 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 OR52R1Q8NGF1 315 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 OR1N1Q8NGS0 311 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 PSMA8Q8TAA3 256 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 ZNF721Q8TF20 911 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 DAZLQ92904 295 aaKnown RBP7.15□□□□□ -1.26
MSH6-211ENST00000606499 NACC2Q96BF6 587 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 CTHRC1Q96CG8 243 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 RCN3Q96D15 328 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 ELP4Q96EB1 424 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 FAM120BQ96EK7 910 aaKnown RBP7.15□□□□□ -1.26
MSH6-211ENST00000606499 AURKBQ96GD4 344 aaPredicted RBP7.15□□□□□ -1.26
MSH6-211ENST00000606499 ITCHQ96J02 903 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 IP6K3Q96PC2 410 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 TUBB6Q9BUF5 446 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 NUDT9Q9BW91 350 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 TRIM8Q9BZR9 551 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 PAIP1Q9H074 479 aaKnown RBP7.15□□□□□ -1.26
MSH6-211ENST00000606499 RMND5AQ9H871 391 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 IL1RL2Q9HB29 575 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 NEUROD4Q9HD90 331 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 EQTNQ9NQ60 294 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 ZCCHC3Q9NUD5 404 aaKnown RBP7.15□□□□□ -1.26
MSH6-211ENST00000606499 ARL8BQ9NVJ2 186 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 DDX18Q9NVP1 670 aaKnown RBP7.15□□□□□ -1.26
MSH6-211ENST00000606499 SLAMF8Q9P0V8 285 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 COPS7AQ9UBW8 275 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 BCAP29Q9UHQ4 241 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 ZNF639Q9UID6 485 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 LEF1Q9UJU2 399 aaPredicted RBP7.15□□□□□ -1.26
MSH6-211ENST00000606499 PCDHGB4Q9UN71 923 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 MAN2B2Q9Y2E5 1009 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 DTX4Q9Y2E6 619 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 NDUFAF1Q9Y375 327 aa7.15□□□□□ -1.26
MSH6-211ENST00000606499 PKD1L2Q7Z442 2459 aa7.15□□□□□ -1.27
MSH6-211ENST00000606499 A0A087WV62 115 aa7.14□□□□□ -1.27
MSH6-211ENST00000606499 A0A096LPI6 279 aa7.14□□□□□ -1.27
MSH6-211ENST00000606499 TRBV11-1A0A0K0K1C0 115 aa7.14□□□□□ -1.27
MSH6-211ENST00000606499 DYTNA2CJ06 578 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms