RNA–Protein interactions for RNA: ENST00000605031.5

FOCAD-215, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-215ENST00000605031 MRPL9Q9BYD2 267 aaKnown RBP3.36□□□□□ -1.87
FOCAD-215ENST00000605031 UBXN6Q9BZV1 441 aa3.36□□□□□ -1.87
FOCAD-215ENST00000605031 KRT23Q9C075 422 aa3.36□□□□□ -1.87
FOCAD-215ENST00000605031 SLC5A7Q9GZV3 580 aa3.36□□□□□ -1.87
FOCAD-215ENST00000605031 RPF1Q9H9Y2 349 aaKnown RBP3.36□□□□□ -1.87
FOCAD-215ENST00000605031 GMEB2Q9UKD1 530 aa3.36□□□□□ -1.87
FOCAD-215ENST00000605031 PILRAQ9UKJ1 303 aa3.36□□□□□ -1.87
FOCAD-215ENST00000605031 FOXA2Q9Y261 457 aaPredicted RBP3.36□□□□□ -1.87
FOCAD-215ENST00000605031 KIF3AQ9Y496 699 aa3.36□□□□□ -1.87
FOCAD-215ENST00000605031 TEX264Q9Y6I9 313 aa3.36□□□□□ -1.87
FOCAD-215ENST00000605031 COLEC10Q9Y6Z7 277 aa3.36□□□□□ -1.87
FOCAD-215ENST00000605031 CCDC171Q6TFL3 1326 aa3.36□□□□□ -1.87
FOCAD-215ENST00000605031 MYH15Q9Y2K3 1946 aa3.36□□□□□ -1.87
FOCAD-215ENST00000605031 FOCADQ5VW36 1801 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 KMT2EQ8IZD2 1858 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 PTPRSQ13332 1948 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 hCG_38984A0A1B0GV85 526 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 M0R296 226 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 SURF4O15260 269 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 FRAT2O75474 233 aaPredicted RBP3.35□□□□□ -1.87
FOCAD-215ENST00000605031 CLN5O75503 358 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 NXPH2O95156 264 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 LETM1O95202 739 aaPredicted RBP3.35□□□□□ -1.87
FOCAD-215ENST00000605031 DUS4LO95620 317 aaKnown RBP3.35□□□□□ -1.87
FOCAD-215ENST00000605031 TYMPP19971 482 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 CYP3A5P20815 502 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 FEN1P39748 380 aaKnown RBP3.35□□□□□ -1.87
FOCAD-215ENST00000605031 MMP12P39900 470 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 HNF4AP41235 474 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 GYG1P46976 350 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 CCR4P51679 360 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 IRX1P78414 480 aaPredicted RBP3.35□□□□□ -1.87
FOCAD-215ENST00000605031 NFATC2Q13469 925 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 SGSM1Q2NKQ1 1148 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 ZNF613Q6PF04 617 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 BLOC1S2Q6QNY1 142 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 C3P1Q6ZMU1 363 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 Q6ZVQ6 151 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 CYP4V2Q6ZWL3 525 aaPredicted RBP3.35□□□□□ -1.87
FOCAD-215ENST00000605031 CCDC91Q7Z6B0 441 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 HSCBQ8IWL3 235 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 SPAG16Q8N0X2 631 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 CCDC185Q8N715 623 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 SMYD1Q8NB12 490 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 CLEC1AQ8NC01 280 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 ZNF519Q8TB69 540 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 GGHQ92820 318 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 RFT1Q96AA3 541 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 BPIFA2Q96DR5 249 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 C5orf30Q96GV9 206 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 PCDHB18PQ96TA0 734 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 IL12RB2Q99665 862 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 OPRPNQ99935 248 aaPredicted RBP3.35□□□□□ -1.87
FOCAD-215ENST00000605031 CUEDC2Q9H467 287 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 MED20Q9H944 212 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 PDRG1Q9NUG6 133 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 CHMP5Q9NZZ3 219 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 THAP10Q9P2Z0 257 aaPredicted RBP3.35□□□□□ -1.87
FOCAD-215ENST00000605031 UBQLN2Q9UHD9 624 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 APPL1Q9UKG1 709 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 EXOGQ9Y2C4 368 aaKnown RBP3.35□□□□□ -1.87
FOCAD-215ENST00000605031 ZNF510Q9Y2H8 683 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 MRPS18CQ9Y3D5 142 aaKnown RBP3.35□□□□□ -1.87
FOCAD-215ENST00000605031 ATP6V1DQ9Y5K8 247 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 ZHX2Q9Y6X8 837 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 PARP14Q460N5 1801 aa3.35□□□□□ -1.87
FOCAD-215ENST00000605031 CHD9Q3L8U1 2897 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 BDP1A6H8Y1 2624 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 IGHV3-38A0A0C4DH36 116 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.34□□□□□ -1.87
FOCAD-215ENST00000605031 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.34□□□□□ -1.87
FOCAD-215ENST00000605031 GPAA1O43292 621 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 ARHGEF9O43307 516 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 VEGFDO43915 354 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 STBD1O95210 358 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 CXCL14O95715 111 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 CALM1P0DP23 149 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 CALM2P0DP24 149 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 CALM3P0DP25 149 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 PRKAR1AP10644 381 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 YBEYP58557 167 aaPredicted RBP3.34□□□□□ -1.87
FOCAD-215ENST00000605031 HMGN5P82970 282 aaKnown RBP3.34□□□□□ -1.87
FOCAD-215ENST00000605031 SLC3A1Q07837 685 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 TCP10Q12799 353 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 CNTN1Q12860 1018 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 CALCOCO2Q13137 446 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 CEACAM7Q14002 265 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 GK2Q14410 553 aaPredicted RBP3.34□□□□□ -1.87
FOCAD-215ENST00000605031 FGD3Q5JSP0 725 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 CES4AQ5XG92 561 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 CDC42EP5Q6NZY7 148 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 SIDT2Q8NBJ9 832 aaKnown RBP3.34□□□□□ -1.87
FOCAD-215ENST00000605031 MSANTD4Q8NCY6 345 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 TRPV1Q8NER1 839 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 LPCAT1Q8NF37 534 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 C8orf46Q8TAG6 207 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 CHURC1Q8WUH1 139 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 SMPDL3AQ92484 453 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 SEPT8Q92599 483 aa3.34□□□□□ -1.87
FOCAD-215ENST00000605031 GTF3AQ92664 365 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms