RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 CDCP1Q9H5V8 836 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 ZBTB20Q9HC78 741 aaPredicted RBP12.89□□□□□ -0.35
RNF40-212ENST00000602784 AIG1Q9NVV5 245 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 MYOTQ9UBF9 498 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 CFL2Q9Y281 166 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 YARS2Q9Y2Z4 477 aaKnown RBP12.89□□□□□ -0.35
RNF40-212ENST00000602784 GPR45Q9Y5Y3 372 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 CPAMD8Q8IZJ3 1885 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 CFAP46Q8IYW2 2715 aa12.89□□□□□ -0.35
RNF40-212ENST00000602784 COL6A6A6NMZ7 2263 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 A0A087WV62 115 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 DYTNA2CJ06 578 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 FCHO1O14526 889 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 PRKNO60260 465 aaPredicted RBP12.88□□□□□ -0.35
RNF40-212ENST00000602784 WDPCPO95876 746 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 CLPSP04118 112 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 SSTR4P31391 388 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 TRHRP34981 398 aaPredicted RBP12.88□□□□□ -0.35
RNF40-212ENST00000602784 NCBP2P52298 156 aaKnown RBP eCLIP12.88□□□□□ -0.35
RNF40-212ENST00000602784 CLNS1AP54105 237 aaKnown RBP12.88□□□□□ -0.35
RNF40-212ENST00000602784 AQP5P55064 265 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 IRX1P78414 480 aaPredicted RBP12.88□□□□□ -0.35
RNF40-212ENST00000602784 MLC1Q15049 377 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 LTB4RQ15722 352 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 GSTA3Q16772 222 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 DPY19L1Q2PZI1 675 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 LSM12Q3MHD2 195 aaKnown RBP12.88□□□□□ -0.35
RNF40-212ENST00000602784 ZNF385BQ569K4 471 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 FCRLBQ6BAA4 426 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 ANKRD26P1Q6NSI1 321 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 FAM111BQ6SJ93 734 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 SLC29A4Q7RTT9 530 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 C9orf40Q8IXQ3 194 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 BEST3Q8N1M1 668 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 SLC15A4Q8N697 577 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 KRTCAP2Q8N6L1 136 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 RBMXL3Q8N7X1 1067 aaKnown RBP12.88□□□□□ -0.35
RNF40-212ENST00000602784 C17orf47Q8NEP4 570 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 ADCY4Q8NFM4 1077 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 OR7A2PQ8NGA2 310 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 OR8J2Q8NGG1 315 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 OR9A2Q8NGT5 310 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 ZFP28Q8NHY6 868 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 TP53INP1Q96A56 240 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 TESCQ96BS2 214 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 DPY30Q9C005 99 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 BHLHE41Q9C0J9 482 aaPredicted RBP12.88□□□□□ -0.35
RNF40-212ENST00000602784 OR10A5Q9H207 317 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 GLIPR2Q9H4G4 154 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 TRIM45Q9H8W5 580 aaPredicted RBP12.88□□□□□ -0.35
RNF40-212ENST00000602784 SLAMF7Q9NQ25 335 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 TCF7L2Q9NQB0 619 aa12.88□□□□□ -0.35
RNF40-212ENST00000602784 TNRC6AQ8NDV7 1962 aaKnown RBP12.87□□□□□ -0.35
RNF40-212ENST00000602784 OR5H15A6NDH6 313 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 UBDO15205 165 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 POLR3GO15318 223 aaPredicted RBP12.87□□□□□ -0.35
RNF40-212ENST00000602784 MAN1A2O60476 641 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 PRAMEF2O60811 474 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 CBX7O95931 251 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 LAMP1P11279 417 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 MRPL19P49406 292 aaKnown RBP12.87□□□□□ -0.35
RNF40-212ENST00000602784 MANFP55145 182 aaKnown RBP12.87□□□□□ -0.35
RNF40-212ENST00000602784 ARG2P78540 354 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 SRSF11Q05519 484 aaKnown RBP12.87□□□□□ -0.35
RNF40-212ENST00000602784 KLRB1Q12918 225 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 EBPQ15125 230 aaKnown RBP12.87□□□□□ -0.35
RNF40-212ENST00000602784 TRMT12Q53H54 448 aaKnown RBP12.87□□□□□ -0.35
RNF40-212ENST00000602784 PIGGQ5H8A4 983 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 FHL5Q5TD97 284 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 Q6ZS92 163 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 TEX19Q8NA77 164 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 THAP3Q8WTV1 239 aaPredicted RBP12.87□□□□□ -0.35
RNF40-212ENST00000602784 CIDECQ96AQ7 238 aaPredicted RBP12.87□□□□□ -0.35
RNF40-212ENST00000602784 WWTR1Q9GZV5 400 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 CLMPQ9H6B4 373 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 SDR39U1Q9NRG7 319 aaPredicted RBP12.87□□□□□ -0.35
RNF40-212ENST00000602784 NTMQ9P121 344 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 PRODH2Q9UF12 536 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 ANAPC2Q9UJX6 822 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 B3GNT3Q9Y2A9 372 aa12.87□□□□□ -0.35
RNF40-212ENST00000602784 C2orf92A0A1B0GVN3 265 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 ITGA10O75578 1167 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 OR2J2O76002 312 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 CD96P40200 585 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 CASRP41180 1078 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 CD97P48960 835 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 EMDP50402 254 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 TNFSF10P50591 281 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 HLCSP50747 726 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 SSR4P51571 173 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 MRPS35P82673 323 aaKnown RBP12.86□□□□□ -0.35
RNF40-212ENST00000602784 TUBA3CQ13748 450 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 RPS6KA2Q15349 733 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 TLR1Q15399 786 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 PDCD4Q53EL6 469 aaKnown RBP12.86□□□□□ -0.35
RNF40-212ENST00000602784 TUBA3EQ6PEY2 450 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 GPALPP1Q8IXQ4 340 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 OR2L13Q8N349 312 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 HORMAD2Q8N7B1 307 aa12.86□□□□□ -0.35
RNF40-212ENST00000602784 ZNF441Q8N8Z8 693 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms