RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ESYT3A0FGR9 886 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 SYT5O00445 386 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 DVL2O14641 736 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 SNX4O95219 450 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 EPPINO95925 133 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 KLK1P06870 262 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 NT5EP21589 574 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 CEACAM8P31997 349 aaPredicted RBP12.05□□□□□ -0.48
RPS28-204ENST00000602140 TMED10P49755 219 aaKnown RBP12.05□□□□□ -0.48
RPS28-204ENST00000602140 SERPINB8P50452 374 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 CDK9P50750 372 aaKnown RBP12.05□□□□□ -0.48
RPS28-204ENST00000602140 XKP51811 444 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 NRG3P56975 720 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 C6orf163Q5TEZ5 329 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 FNDC7Q5VTL7 733 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 FRG2Q64ET8 278 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 TTC19Q6DKK2 380 aaPredicted RBP12.05□□□□□ -0.48
RPS28-204ENST00000602140 PACS2Q86VP3 889 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 PRR22Q8IZ63 422 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 ADIPOR1Q96A54 375 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 FRG2BQ96QU4 278 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 SECISBP2Q96T21 854 aaKnown RBP12.05□□□□□ -0.48
RPS28-204ENST00000602140 ANGPTL4Q9BY76 406 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 MRPL1Q9BYD6 325 aaKnown RBP12.05□□□□□ -0.48
RPS28-204ENST00000602140 OR10A5Q9H207 317 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 UBQLN3Q9H347 655 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 LIME1Q9H400 295 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 CCM2LQ9NUG4 571 aaPredicted RBP12.05□□□□□ -0.48
RPS28-204ENST00000602140 SLC6A5Q9Y345 797 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 IKBKGQ9Y6K9 419 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 MTORP42345 2549 aa12.05□□□□□ -0.48
RPS28-204ENST00000602140 ZFHX3Q15911 3703 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 ITPR3Q14573 2671 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 NINQ8N4C6 2090 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 IL2RAP01589 272 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 HPNP05981 417 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 CPMP14384 443 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 ABCD3P28288 659 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 PHBP35232 272 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 PEX19P40855 299 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 CASP3P42574 277 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 ASCL1P50553 236 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 RPP38P78345 283 aaKnown RBP12.04□□□□□ -0.48
RPS28-204ENST00000602140 TOMM20Q15388 145 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 CCNYL2Q5T2Q4 361 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 UBAP2Q5T6F2 1119 aaKnown RBP12.04□□□□□ -0.48
RPS28-204ENST00000602140 SYT10Q6XYQ8 523 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 PAGE2Q7Z2X7 111 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 LACC1Q8IV20 430 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 PM20D2Q8IYS1 436 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 C17orf53Q8N3J3 647 aaPredicted RBP12.04□□□□□ -0.48
RPS28-204ENST00000602140 OR7G1Q8NGA0 311 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 NINJ1Q92982 152 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 LRRC46Q96FV0 321 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 NSUN5Q96P11 429 aaKnown RBP12.04□□□□□ -0.48
RPS28-204ENST00000602140 SH3GL2Q99962 352 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 NTMT1Q9BV86 223 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 PRDM14Q9GZV8 571 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 CLEC4MQ9H2X3 399 aaPredicted RBP12.04□□□□□ -0.48
RPS28-204ENST00000602140 ZBTB26Q9HCK0 441 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 RASSF1Q9NS23 344 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 ZDHHC18Q9NUE0 388 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 AHSPQ9NZD4 102 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 ZNF629Q9UEG4 869 aaPredicted RBP12.04□□□□□ -0.48
RPS28-204ENST00000602140 ST6GALNAC2Q9UJ37 374 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 ADAM29Q9UKF5 820 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 CAMK2AQ9UQM7 478 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 C15orf41Q9Y2V0 281 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 ARHGAP21Q5T5U3 1957 aa12.04□□□□□ -0.48
RPS28-204ENST00000602140 MAP1AP78559 2803 aaPredicted RBP12.03□□□□□ -0.48
RPS28-204ENST00000602140 STX16-NPEPL1H3BU86 382 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 STX16O14662 325 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 GNB5O14775 395 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 DIAPH2O60879 1101 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 RBP1P09455 135 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 PORP16435 677 aaPredicted RBP12.03□□□□□ -0.48
RPS28-204ENST00000602140 KRT15P19012 456 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 S1PR1P21453 382 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 GPX3P22352 226 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 TIMP3P35625 211 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 ZNF136P52737 540 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 MAPK12P53778 367 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 ETF1P62495 437 aaKnown RBP12.03□□□□□ -0.48
RPS28-204ENST00000602140 IFT88Q13099 833 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 TRAF3Q13114 568 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 NNATQ16517 81 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 FLYWCH1Q4VC44 716 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 EIPR1Q53HC9 387 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 SGO1Q5FBB7 561 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 NSUN5P2Q63ZY6 315 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 VASNQ6EMK4 673 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 POMZP3Q6PJE2 187 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 FAM111BQ6SJ93 734 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 ZNF572Q7Z3I7 529 aaPredicted RBP12.03□□□□□ -0.48
RPS28-204ENST00000602140 METTL4Q8N3J2 472 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 C17orf47Q8NEP4 570 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 RNASE6Q93091 150 aaKnown RBP12.03□□□□□ -0.48
RPS28-204ENST00000602140 HSPBAP1Q96EW2 488 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 FOXC2Q99958 501 aa12.03□□□□□ -0.48
RPS28-204ENST00000602140 BRINP2Q9C0B6 783 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms