RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ZNF407Q9C0G0 2248 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 PKDREJQ9NTG1 2253 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 APCP25054 2843 aa14.54□□□□□ -0.08
VRK3-221ENST00000600284 A0A1W2PS29 197 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 SUPT7LO94864 414 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 OR4F21O95013 312 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 SNX4O95219 450 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 KRT6AP02538 564 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 KRT6BP04259 564 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 ATP1B1P05026 303 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 GSTA1P08263 222 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 CT62P0C5K7 136 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 GABRA1P14867 456 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 NAGAP17050 411 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 IMPDH1P20839 514 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 S1PR1P21453 382 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 NT5EP21589 574 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 ATP5F1P24539 256 aaPredicted RBP14.53□□□□□ -0.08
VRK3-221ENST00000600284 DEKP35659 375 aaKnown RBP14.53□□□□□ -0.08
VRK3-221ENST00000600284 KRT6CP48668 564 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 NUP107P57740 925 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 RPP38P78345 283 aaKnown RBP14.53□□□□□ -0.08
VRK3-221ENST00000600284 MAP4K2Q12851 820 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 CSTF3Q12996 717 aaKnown RBP14.53□□□□□ -0.08
VRK3-221ENST00000600284 RPS6KA2Q15349 733 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 UNC50Q53HI1 259 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 WLSQ5T9L3 541 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 PRAMEF20Q5VT98 475 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 TMEM198Q66K66 360 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 ZNF585AQ6P3V2 769 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 OR5M9Q8NGP3 310 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 TM4SF18Q96CE8 201 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 LURAP1Q96LR2 239 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 ZNF382Q96SR6 550 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 TTYH2Q9BSA4 534 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 DOHHQ9BU89 302 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 FAIM2Q9BWQ8 316 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 KCNJ16Q9NPI9 418 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 B4GALT7Q9UBV7 327 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 ACAD8Q9UKU7 415 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 DNAJC13O75165 2243 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 CACNA1CQ13936 2221 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 EML6Q6ZMW3 1958 aa14.53□□□□□ -0.08
VRK3-221ENST00000600284 ABCA12Q86UK0 2595 aa14.52□□□□□ -0.08
VRK3-221ENST00000600284 CSMD1Q96PZ7 3565 aa14.52□□□□□ -0.08
VRK3-221ENST00000600284 LRRC3CA6NJW4 275 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 FAM47E-STBD1D6RA91 191 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 MANBAO00462 879 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 DLX3O60479 287 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 CDH16O75309 829 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 TRIM3O75382 744 aaPredicted RBP14.52□□□□□ -0.09
VRK3-221ENST00000600284 ULK1O75385 1050 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 CELA3AP09093 270 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 RFPL3SP0C7P2 107 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 TSPAN8P19075 237 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 CSNK2A2P19784 350 aaPredicted RBP14.52□□□□□ -0.09
VRK3-221ENST00000600284 ELAVL4P26378 380 aaKnown RBP14.52□□□□□ -0.09
VRK3-221ENST00000600284 SLC29A2Q14542 456 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 PRICKLE4Q2TBC4 344 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 B3GNT6Q6ZMB0 384 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 VWA5B2Q8N398 1253 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 RPRMLQ8N4K4 120 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 GBP7Q8N8V2 638 aaPredicted RBP14.52□□□□□ -0.09
VRK3-221ENST00000600284 SPPL2AQ8TCT8 520 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 CHTF18Q8WVB6 975 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 DIO2Q92813 273 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 ANGPTL4Q9BY76 406 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 TXLNGYQ9BZA5 131 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 EXO5Q9H790 373 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 PSMC3IPQ9P2W1 217 aaPredicted RBP14.52□□□□□ -0.09
VRK3-221ENST00000600284 DCDC2Q9UHG0 476 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 ZNF639Q9UID6 485 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 MCM8Q9UJA3 840 aa14.52□□□□□ -0.09
VRK3-221ENST00000600284 CCDC151A5D8V7 595 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 FOXO6A8MYZ6 492 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 ERAL1O75616 437 aaKnown RBP14.51□□□□□ -0.09
VRK3-221ENST00000600284 IGFBP2P18065 325 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 CAPN3P20807 821 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 PRKAA2P54646 552 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 TFF3Q07654 80 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 RTL6Q6ICC9 239 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 MEX3BQ6ZN04 569 aaKnown RBP14.51□□□□□ -0.09
VRK3-221ENST00000600284 GPRIN3Q6ZVF9 776 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 C1orf52Q8N6N3 182 aaKnown RBP14.51□□□□□ -0.09
VRK3-221ENST00000600284 CDYL2Q8N8U2 506 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 NEIL3Q8TAT5 605 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 METTL6Q8TCB7 284 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 CTHRC1Q96CG8 243 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 L3HYPDHQ96EM0 354 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 HSPBAP1Q96EW2 488 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 ZNF597Q96LX8 424 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 TMEM237Q96Q45 408 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 FAM215AQ9Y5M1 114 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 ZNF780BQ9Y6R6 833 aa14.51□□□□□ -0.09
VRK3-221ENST00000600284 PHF3Q92576 2039 aaKnown RBP14.5□□□□□ -0.09
VRK3-221ENST00000600284 SERTM1A2A2V5 107 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 ACOX3O15254 700 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 BCAS2O75934 225 aaPredicted RBP14.5□□□□□ -0.09
VRK3-221ENST00000600284 TOXO94900 526 aa14.5□□□□□ -0.09
VRK3-221ENST00000600284 ENO1P06733 434 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms