RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 DCAF10Q5QP82 559 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 BROXQ5VW32 411 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 INO80CQ6PI98 192 aaPredicted RBP11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 SLC2A7Q6PXP3 512 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 TMEM107Q6UX40 140 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 TMEM64Q6YI46 380 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 CCDC81Q6ZN84 652 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 RETREG3Q86VR2 466 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 SNX32Q86XE0 403 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 OR2L13Q8N349 312 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 DPP10Q8N608 796 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 FITM2Q8N6M3 262 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 ZNF321PQ8N8H1 164 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 ZNF615Q8N8J6 731 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 ZSCAN1Q8NBB4 408 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 APCDD1LQ8NCL9 501 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 SIMC1Q8NDZ2 872 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 OR7G1Q8NGA0 311 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 OR1N1Q8NGS0 311 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 M1APQ8TC57 530 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 ELP5Q8TE02 316 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 SNRNP27Q8WVK2 155 aaKnown RBP11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 GTF2H4Q92759 462 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 KAT2AQ92830 837 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 PHF12Q96QT6 1004 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 INPP5KQ9BT40 448 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 SLC25A23Q9BV35 468 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 NUDT9Q9BW91 350 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 OR8D2Q9GZM6 311 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 CXorf36Q9H7Y0 433 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 ZNF160Q9HCG1 818 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 MMP25Q9NPA2 562 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 PTGFRNQ9P2B2 879 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 ZNF223Q9UK11 482 aaPredicted RBP11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 C19orf53Q9UNZ5 99 aaPredicted RBP11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 ERVK-19Q9WJR5 959 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 POLHQ9Y253 713 aa11.78□□□□□ -0.52
CHMP2A-206ENST00000600118 URB1O60287 2271 aaKnown RBP11.77□□□□□ -0.52
CHMP2A-206ENST00000600118 UPK1AO00322 258 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 FBP2O00757 339 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 CELA2AP08217 269 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 ZCCHC18P0CG32 403 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 ICAM2P13598 275 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 PRDX6P30041 224 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 SSTR4P31391 388 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 GPC1P35052 558 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 CDKN2CP42773 168 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 TRPC1P48995 793 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 PGDP52209 483 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 SLC37A1P57057 533 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 SOX8P57073 446 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 COQ5Q5HYK3 327 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 LRIF1Q5T3J3 769 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 TMEM102Q8N9M5 508 aaPredicted RBP11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 OR4A15Q8NGL6 344 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 RP9Q8TA86 221 aaKnown RBP11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 NCLNQ969V3 563 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 FAM120BQ96EK7 910 aaKnown RBP11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 VMP1Q96GC9 406 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 ITCHQ96J02 903 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 ART5Q96L15 291 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 FER1L6-AS2Q96M78 137 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 CNPPD1Q9BV87 410 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 PAIP1Q9H074 479 aaKnown RBP11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 RMND5AQ9H871 391 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 LEF1Q9UJU2 399 aaPredicted RBP11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 PCDHGB4Q9UN71 923 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 NDUFAF1Q9Y375 327 aa11.77□□□□□ -0.53
CHMP2A-206ENST00000600118 CCDC88CQ9P219 2028 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 A0A096LPI6 279 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 TRBV5-3A0A0A0MS03 114 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 LOC100653049A0A140TA62 436 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 BBIP1A8MTZ0 92 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 RFXANKO14593 260 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 ANGPT2O15123 496 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 KRT34O76011 436 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 CPSF4O95639 269 aaKnown RBP11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 SERPINA7P05543 415 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 COX4I1P13073 169 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 EMDP50402 254 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 RRADP55042 308 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 TMPRSS3P57727 454 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 VAC14Q08AM6 782 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 AIMP2Q13155 320 aaKnown RBP11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 GAB1Q13480 694 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 CYLC2Q14093 348 aaPredicted RBP11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 KRT72Q14CN4 511 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 EXOSC7Q15024 291 aaKnown RBP11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 BTBD16Q32M84 506 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 EXOSC6Q5RKV6 272 aaKnown RBP11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 C6orf163Q5TEZ5 329 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 DLEU7Q6UYE1 221 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 APLFQ8IW19 511 aaPredicted RBP11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 KIF2BQ8N4N8 673 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 POU5F2Q8N7G0 328 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 OR52R1Q8NGF1 315 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 OR8K3Q8NH51 312 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 SFXN5Q8TD22 340 aa11.76□□□□□ -0.53
CHMP2A-206ENST00000600118 GIMAP5Q96F15 307 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms