RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 FBXW10Q5XX13 1052 aa19.37■□□□□ 0.69
PNKP-212ENST00000599454 CMC1Q7Z7K0 106 aa19.37■□□□□ 0.69
PNKP-212ENST00000599454 NUDT13Q86X67 352 aa19.37■□□□□ 0.69
PNKP-212ENST00000599454 C17orf47Q8NEP4 570 aa19.37■□□□□ 0.69
PNKP-212ENST00000599454 NAPGQ99747 312 aaPredicted RBP19.37■□□□□ 0.69
PNKP-212ENST00000599454 CXorf21Q9HAI6 301 aa19.37■□□□□ 0.69
PNKP-212ENST00000599454 CAMK2AQ9UQM7 478 aa19.37■□□□□ 0.69
PNKP-212ENST00000599454 RPH3AQ9Y2J0 694 aaPredicted RBP19.37■□□□□ 0.69
PNKP-212ENST00000599454 MBD3L4A6NDZ8 208 aaPredicted RBP19.36■□□□□ 0.69
PNKP-212ENST00000599454 MBD3L3A6NE82 208 aaPredicted RBP19.36■□□□□ 0.69
PNKP-212ENST00000599454 FAM187AA6NFU0 413 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 MBD3L5A6NJ08 208 aaPredicted RBP19.36■□□□□ 0.69
PNKP-212ENST00000599454 GLOD5A6NK44 160 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 ACSL3O95573 720 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 AIFM1O95831 613 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 CTSSP25774 331 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 PIK3R1P27986 724 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 SSTR4P31391 388 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 GMPRP36959 345 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 PIK3CGP48736 1102 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 WNT3P56703 355 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 GNG11P61952 73 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 FUT7Q11130 342 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 NAB1Q13506 487 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 KBTBD12Q3ZCT8 623 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 GALNT12Q8IXK2 581 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 PPM1NQ8N819 430 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 MBD3L2Q8NHZ7 208 aaPredicted RBP19.36■□□□□ 0.69
PNKP-212ENST00000599454 TMEM41AQ96HV5 264 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 ERP44Q9BS26 406 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 CALHM2Q9HA72 323 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 ACOT9Q9Y305 439 aa19.36■□□□□ 0.69
PNKP-212ENST00000599454 WASHC1A8K0Z3 465 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 KDM4EB2RXH2 506 aaPredicted RBP19.35■□□□□ 0.69
PNKP-212ENST00000599454 FOXE1O00358 373 aaPredicted RBP19.35■□□□□ 0.69
PNKP-212ENST00000599454 ATE1O95260 518 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 CASP3P42574 277 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 ALDH18A1P54886 795 aaKnown RBP19.35■□□□□ 0.69
PNKP-212ENST00000599454 GPX6P59796 221 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 KEAP1Q14145 624 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 DEFB113Q30KQ7 82 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 C6orf163Q5TEZ5 329 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 FNDC7Q5VTL7 733 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 METTL2BQ6P1Q9 378 aaKnown RBP19.35■□□□□ 0.69
PNKP-212ENST00000599454 TMEM64Q6YI46 380 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 ADIPOR1Q96A54 375 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 NXNL1Q96CM4 212 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 GNRHR2Q96P88 292 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 TRIB1Q96RU8 372 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 UGT2B28Q9BY64 529 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 DPH5Q9H2P9 285 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 TEX10Q9NXF1 929 aaPredicted RBP19.35■□□□□ 0.69
PNKP-212ENST00000599454 FETUBQ9UGM5 382 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 SLC6A5Q9Y345 797 aa19.35■□□□□ 0.69
PNKP-212ENST00000599454 ARID1AO14497 2285 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 A0A087X1B8 175 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 SEMA3DO95025 777 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 GFAPP14136 432 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 DRD2P14416 443 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 BMP7P18075 431 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 KRT15P19012 456 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 STX2P32856 288 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 GCKP35557 465 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 RCAN2Q14206 197 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 PCBP2Q15366 365 aaKnown RBP eCLIP19.34■□□□□ 0.69
PNKP-212ENST00000599454 TOMM20Q15388 145 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 CPSF6Q16630 551 aaKnown RBP eCLIP19.34■□□□□ 0.69
PNKP-212ENST00000599454 FAM83EQ2M2I3 478 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 BICRALQ6AI39 1079 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 ZNF615Q8N8J6 731 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 L3MBTL4Q8NA19 623 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 OR7G1Q8NGA0 311 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 WDR20Q8TBZ3 569 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 ABTB1Q969K4 478 aaPredicted RBP19.34■□□□□ 0.69
PNKP-212ENST00000599454 NTNG2Q96CW9 530 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 WDYHV1Q96HA8 205 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 SERPINI1Q99574 410 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 OR10A5Q9H207 317 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 EPB41L4BQ9H329 900 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 JKAMPQ9P055 326 aa19.34■□□□□ 0.69
PNKP-212ENST00000599454 TNPO3Q9Y5L0 923 aaKnown RBP19.34■□□□□ 0.69
PNKP-212ENST00000599454 ACTL6AO96019 429 aa19.33■□□□□ 0.68
PNKP-212ENST00000599454 NAGAP17050 411 aa19.33■□□□□ 0.68
PNKP-212ENST00000599454 GTF2H2Q13888 395 aa19.33■□□□□ 0.68
PNKP-212ENST00000599454 PFKFB4Q16877 469 aa19.33■□□□□ 0.68
PNKP-212ENST00000599454 TIGD3Q6B0B8 471 aa19.33■□□□□ 0.68
PNKP-212ENST00000599454 GTF2H2CQ6P1K8 395 aa19.33■□□□□ 0.68
PNKP-212ENST00000599454 TMEM81Q6P7N7 255 aa19.33■□□□□ 0.68
PNKP-212ENST00000599454 BIVMQ86UB2 503 aa19.33■□□□□ 0.68
PNKP-212ENST00000599454 CENPLQ8N0S6 344 aaPredicted RBP19.33■□□□□ 0.68
PNKP-212ENST00000599454 MMP21Q8N119 569 aa19.33■□□□□ 0.68
PNKP-212ENST00000599454 OR4K14Q8NGD5 310 aa19.33■□□□□ 0.68
PNKP-212ENST00000599454 ZPLD1Q8TCW7 415 aa19.33■□□□□ 0.68
PNKP-212ENST00000599454 ZFP3Q96NJ6 502 aa19.33■□□□□ 0.68
PNKP-212ENST00000599454 GSX1Q9H4S2 264 aaPredicted RBP19.33■□□□□ 0.68
PNKP-212ENST00000599454 IPPKQ9H8X2 491 aa19.33■□□□□ 0.68
PNKP-212ENST00000599454 EEF1E1-BLOC1S5C9J1V9 151 aa19.32■□□□□ 0.68
PNKP-212ENST00000599454 PGRMC2O15173 223 aa19.32■□□□□ 0.68
PNKP-212ENST00000599454 EEF1E1O43324 174 aaKnown RBP19.32■□□□□ 0.68
PNKP-212ENST00000599454 RHOXF2BP0C7M4 288 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms