RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 BMP5P22003 454 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 GDF1P27539 372 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 CRABP2P29373 138 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 STX2P32856 288 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 BUD31P41223 144 aaPredicted RBP13.45□□□□□ -0.26
IRF3-223ENST00000599223 MAGEA4P43358 317 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 DUSP8Q13202 625 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 RPS6KA2Q15349 733 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 POM121Q96HA1 1249 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 RILPQ96NA2 401 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 GPR78Q96P69 363 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 CDK15Q96Q40 435 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 PELOQ9BRX2 385 aaKnown RBP13.45□□□□□ -0.26
IRF3-223ENST00000599223 TMUB1Q9BVT8 246 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 UBQLN3Q9H347 655 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 CXorf21Q9HAI6 301 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 SNX15Q9NRS6 342 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.45□□□□□ -0.26
IRF3-223ENST00000599223 LYARQ9NX58 379 aaKnown RBP13.45□□□□□ -0.26
IRF3-223ENST00000599223 QPCTLQ9NXS2 382 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 ADGRE2Q9UHX3 823 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 DTX4Q9Y2E6 619 aa13.45□□□□□ -0.26
IRF3-223ENST00000599223 FAM221AA4D161 298 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 OR6C76A6NM76 312 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 OR7A17O14581 309 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 PGRMC2O15173 223 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 GFAPP14136 432 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 SERPINB3P29508 390 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 TLX1P31314 330 aaPredicted RBP13.44□□□□□ -0.26
IRF3-223ENST00000599223 UQCRC1P31930 480 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 ALDH18A1P54886 795 aaKnown RBP13.44□□□□□ -0.26
IRF3-223ENST00000599223 CUL3Q13618 768 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 GTF2H2Q13888 395 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 MROH9Q5TGP6 573 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 LIPJQ5W064 366 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 DESI1Q6ICB0 168 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 OR52E8Q6IFG1 317 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 GTF2H2CQ6P1K8 395 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 NUDT13Q86X67 352 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 RELL1Q8IUW5 271 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 DND1Q8IYX4 353 aaKnown RBP13.44□□□□□ -0.26
IRF3-223ENST00000599223 PRR22Q8IZ63 422 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 LIX1Q8N485 282 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 OR52B6Q8NGF0 335 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 RHEBL1Q8TAI7 183 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 SPPL2AQ8TCT8 520 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 DIO2Q92813 273 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 MRRFQ96E11 262 aaKnown RBP13.44□□□□□ -0.26
IRF3-223ENST00000599223 FOXC2Q99958 501 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 CENPKQ9BS16 269 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 POLDIP3Q9BY77 421 aaKnown RBP13.44□□□□□ -0.26
IRF3-223ENST00000599223 CLEC4MQ9H2X3 399 aaPredicted RBP13.44□□□□□ -0.26
IRF3-223ENST00000599223 B4GALT7Q9UBV7 327 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 ST6GALNAC2Q9UJ37 374 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 PLEKHA6Q9Y2H5 1048 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 ACOT9Q9Y305 439 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 SLC6A5Q9Y345 797 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 ANGPTL3Q9Y5C1 460 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 PCDHGB3Q9Y5G1 929 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 PCDHGA11Q9Y5H2 935 aa13.44□□□□□ -0.26
IRF3-223ENST00000599223 A0A087X1B8 175 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 SYCE1LA8MT33 242 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 ALDOAP04075 364 aaKnown RBP13.43□□□□□ -0.26
IRF3-223ENST00000599223 MYZAPP0CAP1 466 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 SLC35E2P0CK97 266 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 PTX3P26022 381 aaPredicted RBP13.43□□□□□ -0.26
IRF3-223ENST00000599223 CEACAM8P31997 349 aaPredicted RBP13.43□□□□□ -0.26
IRF3-223ENST00000599223 PHBP35232 272 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 KIR2DL3P43628 341 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 ZNF136P52737 540 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 ARFIP1P53367 373 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 TBL3Q12788 808 aaKnown RBP13.43□□□□□ -0.26
IRF3-223ENST00000599223 NAB1Q13506 487 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 PCBP2Q15366 365 aaKnown RBP eCLIP13.43□□□□□ -0.263e-7■■■■■ 29.6
IRF3-223ENST00000599223 CEBPEQ15744 281 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 NNATQ16517 81 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 TECRLQ5HYJ1 363 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 CYP20A1Q6UW02 462 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 GALNT12Q8IXK2 581 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 MMP21Q8N119 569 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 PLD6Q8N2A8 252 aaKnown RBP13.43□□□□□ -0.26
IRF3-223ENST00000599223 ZNF615Q8N8J6 731 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 L3MBTL4Q8NA19 623 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 NINJ1Q92982 152 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 ADIPOR1Q96A54 375 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 NTNG2Q96CW9 530 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 NSUN5Q96P11 429 aaKnown RBP13.43□□□□□ -0.26
IRF3-223ENST00000599223 ZIM3Q96PE6 472 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 TIMP4Q99727 224 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 TXLNGYQ9BZA5 131 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 STMN4Q9H169 189 aaPredicted RBP13.43□□□□□ -0.26
IRF3-223ENST00000599223 IPPKQ9H8X2 491 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 SLC24A3Q9HC58 644 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 RASSF1Q9NS23 344 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 CPSF2Q9P2I0 782 aaKnown RBP13.43□□□□□ -0.26
IRF3-223ENST00000599223 CBLCQ9ULV8 474 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 C15orf41Q9Y2V0 281 aa13.43□□□□□ -0.26
IRF3-223ENST00000599223 A0A096LPK6 155 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 A0A1B0GTL3 188 aa13.42□□□□□ -0.26
IRF3-223ENST00000599223 C2orf92A0A1B0GVN3 265 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms