RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 SIMC1Q8NDZ2 872 aa11.08□□□□□ -0.64
SOX2-OT-228ENST00000597828 SPPL2AQ8TCT8 520 aa11.08□□□□□ -0.64
SOX2-OT-228ENST00000597828 NSUN5Q96P11 429 aaKnown RBP11.08□□□□□ -0.64
SOX2-OT-228ENST00000597828 CLEC4MQ9H2X3 399 aaPredicted RBP11.08□□□□□ -0.64
SOX2-OT-228ENST00000597828 NOL11Q9H8H0 719 aaKnown RBP11.08□□□□□ -0.64
SOX2-OT-228ENST00000597828 CXorf21Q9HAI6 301 aa11.08□□□□□ -0.64
SOX2-OT-228ENST00000597828 QPCTLQ9NXS2 382 aa11.08□□□□□ -0.64
SOX2-OT-228ENST00000597828 B4GALT7Q9UBV7 327 aa11.08□□□□□ -0.64
SOX2-OT-228ENST00000597828 PLEKHA6Q9Y2H5 1048 aa11.08□□□□□ -0.64
SOX2-OT-228ENST00000597828 UTP11Q9Y3A2 253 aaKnown RBP11.08□□□□□ -0.64
SOX2-OT-228ENST00000597828 NPFFR2Q9Y5X5 522 aa11.08□□□□□ -0.64
SOX2-OT-228ENST00000597828 FLNAP21333 2647 aaKnown RBP11.08□□□□□ -0.64
SOX2-OT-228ENST00000597828 NF1P21359 2839 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 A0A1B0GTL3 188 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 GNB5O14775 395 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 UGDHO60701 494 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 TRAPPC6AO75865 159 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 KLHL2O95198 593 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 SLC35E2P0CK97 266 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 NT5EP21589 574 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 TACR1P25103 407 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 PIK3R1P27986 724 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 SOX18P35713 384 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 KIR2DL3P43628 341 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 ASCL1P50553 236 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 AGFG1P52594 562 aaKnown RBP11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 ARFIP1P53367 373 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 DUSP2Q05923 314 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 TRAF3Q13114 568 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 BIKQ13323 160 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 TOMM20Q15388 145 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 FAM83EQ2M2I3 478 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 FLYWCH1Q4VC44 716 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 EIPR1Q53HC9 387 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 WIPI1Q5MNZ9 446 aaPredicted RBP11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 TMEM198Q66K66 360 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 FAM180BQ6P0A1 224 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 PLXDC2Q6UX71 529 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 GALNT12Q8IXK2 581 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 DND1Q8IYX4 353 aaKnown RBP11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 TAGAPQ8N103 731 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 L3MBTL4Q8NA19 623 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 ADIPOR1Q96A54 375 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 REPS1Q96D71 796 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 PHF21BQ96EK2 531 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 GNRHR2Q96P88 292 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 TIMP4Q99727 224 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 TMUB1Q9BVT8 246 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 MRPL1Q9BYD6 325 aaKnown RBP11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 RAB17Q9H0T7 212 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 NXF5Q9H1B4 397 aaKnown RBP11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 OR10A5Q9H207 317 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 VPS11Q9H270 941 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 UBQLN3Q9H347 655 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 WDR41Q9HAD4 459 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 ZBTB26Q9HCK0 441 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 ST6GALNAC2Q9UJ37 374 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 CBLCQ9ULV8 474 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 CAMK2AQ9UQM7 478 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 C15orf41Q9Y2V0 281 aa11.07□□□□□ -0.64
SOX2-OT-228ENST00000597828 MAP1AP78559 2803 aaPredicted RBP11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 C2orf72A6NCS6 295 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 HSPB2A8KAH6 182 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 CLDN9O95484 217 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 EPPINO95925 133 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 HPNP05981 417 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 KLK1P06870 262 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 GPX3P22352 226 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 ABCD3P28288 659 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 CEACAM8P31997 349 aaPredicted RBP11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 GALNSP34059 522 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 CASP3P42574 277 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 MASP1P48740 699 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 SERPINB8P50452 374 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 CDK9P50750 372 aaKnown RBP11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 CAV1Q03135 178 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 FUT7Q11130 342 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 TBL3Q12788 808 aaKnown RBP11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 EXOSC7Q15024 291 aaKnown RBP11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 ACAP2Q15057 778 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 HSPB2Q16082 182 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 HLA-DQA1Q5Y7H0 255 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 FAM111BQ6SJ93 734 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 CDC20BQ86Y33 519 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 MMGT1Q8N4V1 131 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 C7orf57Q8NEG2 295 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 MYRIPQ8NFW9 859 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 RMND5BQ96G75 393 aaPredicted RBP11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 POM121Q96HA1 1249 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 TRIB1Q96RU8 372 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 FOXC2Q99958 501 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 ITPAQ9BY32 194 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 UGT2B28Q9BY64 529 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 ANGPTL4Q9BY76 406 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 PRDM14Q9GZV8 571 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 CXXC4Q9H2H0 198 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 RASSF1Q9NS23 344 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 FARSBQ9NSD9 589 aaKnown RBP11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 ZDHHC18Q9NUE0 388 aa11.06□□□□□ -0.64
SOX2-OT-228ENST00000597828 NINJ2Q9NZG7 142 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms