RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 ZFP64Q9NPA5 681 aa16.5■□□□□ 0.23
CHMP2A-203ENST00000597209 ZNF639Q9UID6 485 aa16.5■□□□□ 0.23
CHMP2A-203ENST00000597209 MCM8Q9UJA3 840 aa16.5■□□□□ 0.23
CHMP2A-203ENST00000597209 BOKQ9UMX3 212 aaPredicted RBP16.5■□□□□ 0.23
CHMP2A-203ENST00000597209 LIPGQ9Y5X9 500 aa16.5■□□□□ 0.23
CHMP2A-203ENST00000597209 CCDC151A5D8V7 595 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 NPIPA2E9PIF3 369 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 NPIPA3F8WFD2 350 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 GOLGA8RI6L899 631 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 TP53I11O14683 189 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 ENO1P06733 434 aaKnown RBP16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 CSNK2A2P19784 350 aaPredicted RBP16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 NT5EP21589 574 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 HMOX2P30519 316 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 MAN2A2P49641 1150 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 TMED10P49755 219 aaKnown RBP16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 KCNJ2P63252 427 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 MGAT2Q10469 447 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 PRICKLE4Q2TBC4 344 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 TCHHL1Q5QJ38 904 aaPredicted RBP16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 SH2D5Q6ZV89 423 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 ACAD11Q709F0 780 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 ACBD4Q8NC06 268 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 FAM13CQ8NE31 585 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 CA5BP1Q8WTZ4 195 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 CTHRC1Q96CG8 243 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 ZNF703Q9H7S9 590 aaPredicted RBP16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 ACKR4Q9NPB9 350 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 TBK1Q9UHD2 729 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 CFL2Q9Y281 166 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 NPFFR2Q9Y5X5 522 aa16.49■□□□□ 0.23
CHMP2A-203ENST00000597209 ATP6AP2A0A1C7CYW4 349 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 C19orf84I3L1E1 186 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 GLRA3O75311 464 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 ATP6AP2O75787 350 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 ESRRBO95718 433 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 DRD2P14416 443 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 NAGAP17050 411 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 NRG3P56975 720 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 RPS6KA2Q15349 733 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 PRAMEF20Q5VT98 475 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 GDF7Q7Z4P5 450 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 TDRPQ86YL5 185 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 VWA5B2Q8N398 1253 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 SPPL2AQ8TCT8 520 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 RND1Q92730 232 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 SARAFQ96BY9 339 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 ZNF681Q96N22 645 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 HBEGFQ99075 208 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 SPOCK3Q9BQ16 436 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 ENKD1Q9H0I2 346 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 L2HGDHQ9H9P8 463 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 PNPLA3Q9NST1 481 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 SIRT5Q9NXA8 310 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 MAT2BQ9NZL9 334 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 EMCNQ9ULC0 261 aa16.48■□□□□ 0.23
CHMP2A-203ENST00000597209 ZNF407Q9C0G0 2248 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 TRGV5A0A0B4J1U4 118 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 A0A1W2PPM1 405 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 LRRC3CA6NJW4 275 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 FIGNL2A6NMB9 653 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 H3BQF6 201 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 TRIM3O75382 744 aaPredicted RBP16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 ERAL1O75616 437 aaKnown RBP16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 HOXD4P09016 255 aaPredicted RBP16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 CELA3AP09093 270 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 RFPL3SP0C7P2 107 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 CHN1P15882 459 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 GPX3P22352 226 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 ACVR2AP27037 513 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 TNFRSF8P28908 595 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 CHRNB4P30926 498 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 FEN1P39748 380 aaKnown RBP16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 KIR3DL1P43629 444 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 RPP38P78345 283 aaKnown RBP16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 SPIN4Q56A73 249 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 GALNT18Q6P9A2 607 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 ZYG11AQ6WRX3 759 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 MMP21Q8N119 569 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 LRRN4CLQ8ND94 238 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 LILRB4Q8NHJ6 448 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 KLHL29Q96CT2 875 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 NTNG2Q96CW9 530 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 C11orf24Q96F05 449 aaPredicted RBP16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 TREX2Q9BQ50 279 aaPredicted RBP16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 DOHHQ9BU89 302 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 ANGPTL4Q9BY76 406 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 ACPTQ9BZG2 426 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 GSTO2Q9H4Y5 243 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 LDAHQ9H6V9 325 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 RNF6Q9Y252 685 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 PCDHGB3Q9Y5G1 929 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 ZNF780BQ9Y6R6 833 aa16.47■□□□□ 0.23
CHMP2A-203ENST00000597209 G3V2L1 256 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 WDR1O75083 606 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 CDH16O75309 829 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 SNX4O95219 450 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 SOX18P35713 384 aa16.46■□□□□ 0.23
CHMP2A-203ENST00000597209 GSTM5P46439 218 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms