RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CACNA1BQ00975 2339 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 A0A0G2JND7 137 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 GMNCA6NCL1 334 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 SYNDIG1LA6NDD5 238 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 UPK1AO00322 258 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 PDPK1O15530 556 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 IFI6P09912 130 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 ICAM2P13598 275 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 IDO1P14902 403 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 TNNI3P19429 210 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 MPIP34949 423 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 ATP4BP51164 291 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 PGDP52209 483 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 RRADP55042 308 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 MLF1P58340 268 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 GNGT1P63211 74 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 HBA1P69905 142 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 RNF4P78317 190 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 EXOSC7Q15024 291 aaKnown RBP9.81□□□□□ -0.84
LIG1-210ENST00000596332 EBPQ15125 230 aaKnown RBP9.81□□□□□ -0.84
LIG1-210ENST00000596332 TLR1Q15399 786 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 CPTPQ5TA50 214 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 IGFL3Q6UXB1 125 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 GALNT12Q8IXK2 581 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 CLECL1Q8IZS7 167 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 OR2L13Q8N349 312 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 SIRT6Q8N6T7 355 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 C7orf57Q8NEG2 295 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 OR8K3Q8NH51 312 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 DAZLQ92904 295 aaKnown RBP9.81□□□□□ -0.84
LIG1-210ENST00000596332 NTNG2Q96CW9 530 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 SIKE1Q9BRV8 207 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 PELOQ9BRX2 385 aaKnown RBP9.81□□□□□ -0.84
LIG1-210ENST00000596332 DUSP26Q9BV47 211 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 DPY30Q9C005 99 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 BHLHE41Q9C0J9 482 aaPredicted RBP9.81□□□□□ -0.84
LIG1-210ENST00000596332 OR8D2Q9GZM6 311 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 EPS8L2Q9H6S3 715 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 CXorf36Q9H7Y0 433 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 MIEF1Q9NQG6 463 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 SLC6A13Q9NSD5 602 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 ZIM2Q9NZV7 527 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 C19orf53Q9UNZ5 99 aaPredicted RBP9.81□□□□□ -0.84
LIG1-210ENST00000596332 CSAG2Q9Y5P2 127 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 ZNF780BQ9Y6R6 833 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 ATRXP46100 2492 aa9.81□□□□□ -0.84
LIG1-210ENST00000596332 SPENQ96T58 3664 aaKnown RBP9.8□□□□□ -0.84
LIG1-210ENST00000596332 A0A087WV62 115 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 TRBV11-1A0A0K0K1C0 115 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 SNX3O60493 162 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 SLC22A3O75751 556 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 COX7A2P14406 83 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 NT5EP21589 574 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 ITGA3P26006 1051 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 MC3RP41968 323 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 CDKN2CP42773 168 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 CLCN2P51788 898 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 NCBP2P52298 156 aaKnown RBP eCLIP9.8□□□□□ -0.84
LIG1-210ENST00000596332 ARFIP2P53365 341 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 RHDQ02161 417 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 FAM174BQ3ZCQ3 159 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 METTL21CQ5VZV1 264 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 TCTN3Q6NUS6 607 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 JMJD6Q6NYC1 403 aaPredicted RBP9.8□□□□□ -0.84
LIG1-210ENST00000596332 BLOC1S3Q6QNY0 202 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 ACAD11Q709F0 780 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 R3HCC1LQ7Z5L2 792 aaKnown RBP9.8□□□□□ -0.84
LIG1-210ENST00000596332 VWA5B2Q8N398 1253 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 CLEC1AQ8NC01 280 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 GOT1L1Q8NHS2 421 aaPredicted RBP9.8□□□□□ -0.84
LIG1-210ENST00000596332 C16orf52Q8NHV5 167 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 OR5P2Q8WZ92 322 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 VMP1Q96GC9 406 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 VSTM2LQ96N03 204 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 BBS4Q96RK4 519 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 ELAC2Q9BQ52 826 aaKnown RBP9.8□□□□□ -0.84
LIG1-210ENST00000596332 INPP5KQ9BT40 448 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 OR10A5Q9H207 317 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 CDCP1Q9H5V8 836 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 TRIM45Q9H8W5 580 aaPredicted RBP9.8□□□□□ -0.84
LIG1-210ENST00000596332 SAR1AQ9NR31 198 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 PTGFRNQ9P2B2 879 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 MAP10Q9P2G4 905 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 CFAP46Q8IYW2 2715 aa9.8□□□□□ -0.84
LIG1-210ENST00000596332 PRSS51A0A1B0GVH4 220 aa9.79□□□□□ -0.84
LIG1-210ENST00000596332 A0A1W2PRB8 838 aa9.79□□□□□ -0.84
LIG1-210ENST00000596332 ERVH48-1M5A8F1 160 aa9.79□□□□□ -0.84
LIG1-210ENST00000596332 RNASET2O00584 256 aaKnown RBP9.79□□□□□ -0.84
LIG1-210ENST00000596332 ADAM10O14672 748 aa9.79□□□□□ -0.84
LIG1-210ENST00000596332 OR10H2O60403 315 aa9.79□□□□□ -0.84
LIG1-210ENST00000596332 ZFAND5O76080 213 aa9.79□□□□□ -0.84
LIG1-210ENST00000596332 C6orf47O95873 294 aa9.79□□□□□ -0.84
LIG1-210ENST00000596332 PGRP06401 933 aa9.79□□□□□ -0.84
LIG1-210ENST00000596332 CT45A8P0DMV1 189 aa9.79□□□□□ -0.84
LIG1-210ENST00000596332 CT45A9P0DMV2 189 aa9.79□□□□□ -0.84
LIG1-210ENST00000596332 CAPN3P20807 821 aa9.79□□□□□ -0.84
LIG1-210ENST00000596332 HPCAL1P37235 193 aa9.79□□□□□ -0.84
LIG1-210ENST00000596332 MAN2A2P49641 1150 aa9.79□□□□□ -0.84
LIG1-210ENST00000596332 PSG6Q00889 435 aa9.79□□□□□ -0.84
LIG1-210ENST00000596332 SRSF11Q05519 484 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms