RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 RPS13P62277 151 aaKnown RBP16.54■□□□□ 0.24
HOMER3-208ENST00000595756 CUL3Q13618 768 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 HYAL4Q2M3T9 481 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 SPRED3Q2MJR0 410 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 ZNF750Q32MQ0 723 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 PIGGQ5H8A4 983 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 EMC4Q5J8M3 183 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 LETMD1Q6P1Q0 360 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 FAM47EQ6ZV65 393 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 NUDCD3Q8IVD9 361 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 ST13P4Q8IZP2 240 aaPredicted RBP16.54■□□□□ 0.24
HOMER3-208ENST00000595756 FAM109AQ8N4B1 249 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 METTL6Q8TCB7 284 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 SLC22A8Q8TCC7 542 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 SENP5Q96HI0 755 aaPredicted RBP16.54■□□□□ 0.24
HOMER3-208ENST00000595756 SERPINI1Q99574 410 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 GATA5Q9BWX5 397 aaPredicted RBP16.54■□□□□ 0.24
HOMER3-208ENST00000595756 DEFB127Q9H1M4 99 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 IL1RL2Q9HB29 575 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 MID1IP1Q9NPA3 183 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 AHSPQ9NZD4 102 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 ATG4BQ9Y4P1 393 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 HRH3Q9Y5N1 445 aa16.54■□□□□ 0.24
HOMER3-208ENST00000595756 TEP1Q99973 2627 aaKnown RBP16.53■□□□□ 0.24
HOMER3-208ENST00000595756 A0A0A6YYD5 115 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 G3V3Y1 287 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 PPP6CO00743 305 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 ULK1O75385 1050 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 PDE9AO76083 593 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 SNUPNO95149 360 aaKnown RBP16.53■□□□□ 0.24
HOMER3-208ENST00000595756 P04436 131 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 CCL3P10147 92 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 HSD3B1P14060 373 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 ALOX15P16050 662 aaPredicted RBP16.53■□□□□ 0.24
HOMER3-208ENST00000595756 HSD3B2P26439 372 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 CHRNB4P30926 498 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 SERPINB4P48594 390 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 TBL3Q12788 808 aaKnown RBP16.53■□□□□ 0.24
HOMER3-208ENST00000595756 HHATQ5VTY9 493 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 C18orf63Q68DL7 685 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 MRM1Q6IN84 353 aaKnown RBP16.53■□□□□ 0.24
HOMER3-208ENST00000595756 OR4N5Q8IXE1 308 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 DND1Q8IYX4 353 aaKnown RBP16.53■□□□□ 0.24
HOMER3-208ENST00000595756 SLC15A4Q8N697 577 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 CDYL2Q8N8U2 506 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 PPP1R14CQ8TAE6 165 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 SELENOMQ8WWX9 145 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 RBM18Q96H35 190 aaKnown RBP16.53■□□□□ 0.24
HOMER3-208ENST00000595756 ATP6V1G3Q96LB4 118 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 BRF2Q9HAW0 419 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 SH2D2AQ9NP31 389 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 NKIRAS1Q9NYS0 192 aa16.53■□□□□ 0.24
HOMER3-208ENST00000595756 A0A1B0GVC2 190 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 TMEM120BA0PK00 339 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 HMGB1P1B2RPK0 211 aaPredicted RBP16.52■□□□□ 0.24
HOMER3-208ENST00000595756 BCKDKO14874 412 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 PROM1O43490 865 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 CRCPO75575 148 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 SEMA3DO95025 777 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 NADKO95544 446 aaPredicted RBP16.52■□□□□ 0.24
HOMER3-208ENST00000595756 DHRS4L1P0CG22 281 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 NR2F6P10588 404 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 IGFBP2P18065 325 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 BSGP35613 385 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 MAGEA5P43359 124 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 NR0B1P51843 470 aaKnown RBP16.52■□□□□ 0.24
HOMER3-208ENST00000595756 FOXO1Q12778 655 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 DGAT2L6Q6ZPD8 337 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 ACAD11Q709F0 780 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 NUDT13Q86X67 352 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 TMEM251Q8N6I4 163 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 GBP7Q8N8V2 638 aaPredicted RBP16.52■□□□□ 0.24
HOMER3-208ENST00000595756 RND1Q92730 232 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 SPACA9Q96E40 222 aaPredicted RBP16.52■□□□□ 0.24
HOMER3-208ENST00000595756 SH3GL2Q99962 352 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 DDX31Q9H8H2 851 aaKnown RBP16.52■□□□□ 0.24
HOMER3-208ENST00000595756 ZNF225Q9UK10 706 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 RNF6Q9Y252 685 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 ASB4Q9Y574 426 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 LIPGQ9Y5X9 500 aa16.52■□□□□ 0.24
HOMER3-208ENST00000595756 CCDC168Q8NDH2 2452 aa16.52■□□□□ 0.23
HOMER3-208ENST00000595756 SERTM1A2A2V5 107 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 FIGNL2A6NMB9 653 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 HRKO00198 91 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 AQP7O14520 342 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 TMPRSS11DO60235 418 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 EEDO75530 441 aaKnown RBP16.51■□□□□ 0.23
HOMER3-208ENST00000595756 PRKRAO75569 313 aaKnown RBP16.51■□□□□ 0.23
HOMER3-208ENST00000595756 NEFHP12036 1026 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 GRK2P25098 689 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 GALNSP34059 522 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 DNASE1L1P49184 302 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 NEK2P51955 445 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 ZNF791Q3KP31 576 aaPredicted RBP16.51■□□□□ 0.23
HOMER3-208ENST00000595756 CYP20A1Q6UW02 462 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 LYPD8Q6UX82 237 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 MEX3BQ6ZN04 569 aaKnown RBP16.51■□□□□ 0.23
HOMER3-208ENST00000595756 TRILQ7L0X0 811 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 SLC29A4Q7RTT9 530 aa16.51■□□□□ 0.23
HOMER3-208ENST00000595756 KIRREL3Q8IZU9 778 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms