RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 NADKO95544 446 aaPredicted RBP13.47□□□□□ -0.25
VRK3-206ENST00000594090 JUNP05412 331 aaKnown RBP13.47□□□□□ -0.25
VRK3-206ENST00000594090 SOX18P35713 384 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 UQCRFS1P47985 274 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 KCNC4Q03721 635 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 PDCD2Q16342 344 aaPredicted RBP13.47□□□□□ -0.25
VRK3-206ENST00000594090 MAPKAPK3Q16644 382 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 PRSS53Q2L4Q9 553 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 ATP6AP1LQ52LC2 224 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 PIGGQ5H8A4 983 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 ZNF324BQ6AW86 544 aaPredicted RBP13.47□□□□□ -0.25
VRK3-206ENST00000594090 IL20RBQ6UXL0 311 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 CCDC116Q8IYX3 515 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 OR9A2Q8NGT5 310 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 SLC22A8Q8TCC7 542 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 ZNF675Q8TD23 568 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 ATP6V1G3Q96LB4 118 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 TSSK3Q96PN8 268 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 BBS4Q96RK4 519 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 SH3GL2Q99962 352 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 OR10A5Q9H207 317 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 VIPAS39Q9H9C1 493 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 OLAHQ9NV23 265 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 TAS2R7Q9NYW3 318 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 ZNF639Q9UID6 485 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 ERVK-11Q9UQG0 969 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 KLF13Q9Y2Y9 288 aaPredicted RBP13.47□□□□□ -0.25
VRK3-206ENST00000594090 CNTRLQ7Z7A1 2325 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 C2orf92A0A1B0GVN3 265 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 ASPDHA6ND91 283 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 PEX11AO75192 247 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 CBX7O95931 251 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 PCSK2P16519 638 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 GNLYP22749 145 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 MRPS35P82673 323 aaKnown RBP13.47□□□□□ -0.25
VRK3-206ENST00000594090 DUSP8Q13202 625 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 EXOSC7Q15024 291 aaKnown RBP13.47□□□□□ -0.25
VRK3-206ENST00000594090 TTMPQ5BVD1 217 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 ZNF628Q5EBL2 1059 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 OPN5Q6U736 354 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 MDGA2Q7Z553 956 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 FAM9CQ8IZT9 166 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 KIRREL3Q8IZU9 778 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 ZNF441Q8N8Z8 693 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 FAM98AQ8NCA5 519 aaKnown RBP13.47□□□□□ -0.25
VRK3-206ENST00000594090 DNAJB8Q8NHS0 232 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 C16orf52Q8NHV5 167 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 NR4A3Q92570 626 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 GFM2Q969S9 779 aaKnown RBP13.47□□□□□ -0.25
VRK3-206ENST00000594090 ZNF764Q96H86 408 aaPredicted RBP13.47□□□□□ -0.25
VRK3-206ENST00000594090 FRMD6Q96NE9 622 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 SLX1AQ9BQ83 275 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 CLMPQ9H6B4 373 aa13.47□□□□□ -0.25
VRK3-206ENST00000594090 RELNP78509 3460 aa13.46□□□□□ -0.25
VRK3-206ENST00000594090 MYO1GB0I1T2 1018 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 LRATO95237 230 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 CRYABP02511 175 aaKnown RBP13.46□□□□□ -0.26
VRK3-206ENST00000594090 BCKDHAP12694 445 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 EDN3P14138 238 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 MAPK1P28482 360 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 NTSP30990 170 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 MPIP34949 423 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 ASMTP46597 345 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 RPL14P50914 215 aaKnown RBP13.46□□□□□ -0.26
VRK3-206ENST00000594090 TDGF1P3P51864 188 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 MRPL49Q13405 166 aaKnown RBP13.46□□□□□ -0.26
VRK3-206ENST00000594090 TRMT12Q53H54 448 aaKnown RBP13.46□□□□□ -0.26
VRK3-206ENST00000594090 C6orf136Q5SQH8 315 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 LYPD8Q6UX82 237 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.46□□□□□ -0.26
VRK3-206ENST00000594090 SLC15A4Q8N697 577 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 PSD4Q8NDX1 1056 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 SIMC1Q8NDZ2 872 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 C17orf47Q8NEP4 570 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 OR52R1Q8NGF1 315 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 CLHC1Q8NHS4 586 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 RAB3IL1Q8TBN0 382 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 ADIPOR1Q96A54 375 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 TUBGCP3Q96CW5 907 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 ERP27Q96DN0 273 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 REEP4Q9H6H4 257 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 TIMMDC1Q9NPL8 285 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 RYDENQ9NUL5 291 aaKnown RBP13.46□□□□□ -0.26
VRK3-206ENST00000594090 BCAP29Q9UHQ4 241 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 BAIAP2L1Q9UHR4 511 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 DTX4Q9Y2E6 619 aa13.46□□□□□ -0.26
VRK3-206ENST00000594090 CROCCQ5TZA2 2017 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 AKAP10O43572 662 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 SNNO75324 88 aaPredicted RBP13.45□□□□□ -0.26
VRK3-206ENST00000594090 CBX6O95503 412 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 GPX3P22352 226 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 NR0B1P51843 470 aaKnown RBP13.45□□□□□ -0.26
VRK3-206ENST00000594090 NCBP2P52298 156 aaKnown RBP eCLIP13.45□□□□□ -0.26
VRK3-206ENST00000594090 SRSF11Q05519 484 aaKnown RBP13.45□□□□□ -0.26
VRK3-206ENST00000594090 PDE7AQ13946 482 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 ZNF791Q3KP31 576 aaPredicted RBP13.45□□□□□ -0.26
VRK3-206ENST00000594090 ZNF385BQ569K4 471 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 HLA-DQA1Q5Y7H0 255 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 ANKRD26P1Q6NSI1 321 aa13.45□□□□□ -0.26
VRK3-206ENST00000594090 RTL4Q6ZR62 310 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms