RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 TBC1D29Q9UFV1 150 aa13.5□□□□□ -0.25
RANBP3-229ENST00000592771 NDOR1Q9UHB4 597 aa13.5□□□□□ -0.25
RANBP3-229ENST00000592771 PRAMEF33A0A0G2JMD5 474 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 A0A1W2PRB8 838 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 CCRL2O00421 344 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 RTCAO00442 366 aaKnown RBP13.49□□□□□ -0.25
RANBP3-229ENST00000592771 TNFRSF10CO14798 259 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 TBX1O43435 398 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 OXSR1O95747 527 aaPredicted RBP13.49□□□□□ -0.25
RANBP3-229ENST00000592771 OPN1SWP03999 348 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 IFNW1P05000 195 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 GABRG2P18507 467 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 SLC15A1P46059 708 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 SNRPGP62308 76 aaKnown RBP13.49□□□□□ -0.25
RANBP3-229ENST00000592771 SELENBP1Q13228 472 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 SPANXN2Q5MJ10 180 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 PLAG1Q6DJT9 500 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 FRMPD2BQ6IN97 320 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 NUDT13Q86X67 352 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 KRT73Q86Y46 540 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 FAM46DQ8NEK8 389 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 B3GNT7Q8NFL0 401 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 MSANTD3Q96H12 275 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 TRNT1Q96Q11 434 aaKnown RBP13.49□□□□□ -0.25
RANBP3-229ENST00000592771 TWSG1Q9GZX9 223 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 MIEF1Q9NQG6 463 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 TRAPPC4Q9Y296 219 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 CA5BQ9Y2D0 317 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 ZNF451Q9Y4E5 1061 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 UNC80Q8N2C7 3258 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 DSPPQ9NZW4 1301 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 TCRBV21S2A2A0A5A6 115 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 PRAMEF25A6NGN4 478 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 LRRC72A6NJI9 287 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 H0Y8X5 98 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 H3BQ06 376 aaPredicted RBP13.49□□□□□ -0.25
RANBP3-229ENST00000592771 SNPHO15079 494 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 ZW10O43264 779 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 EML2O95834 649 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 APOA1P02647 267 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 NDUFS1P28331 727 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 FRKP42685 505 aaPredicted RBP13.49□□□□□ -0.25
RANBP3-229ENST00000592771 TRA2BP62995 288 aaKnown RBP13.49□□□□□ -0.25
RANBP3-229ENST00000592771 CD300CQ08708 224 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 TMEM35AQ53FP2 167 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 REEP3Q6NUK4 255 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 ENPP7Q6UWV6 458 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 PRR23CQ6ZRP0 262 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 CCDC190Q86UF4 302 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 OR2L3Q8NG85 312 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 OR52J3Q8NH60 311 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 MGLLQ99685 303 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 NLNQ9BYT8 704 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 OR51E2Q9H255 320 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 AMBNQ9NP70 447 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 MRPS30Q9NP92 439 aaKnown RBP13.49□□□□□ -0.25
RANBP3-229ENST00000592771 PCDHGB6Q9Y5F9 930 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 COLEC10Q9Y6Z7 277 aa13.49□□□□□ -0.25
RANBP3-229ENST00000592771 SPTBN5Q9NRC6 3674 aaKnown RBP13.48□□□□□ -0.25
RANBP3-229ENST00000592771 MDC1Q14676 2089 aaKnown RBP13.48□□□□□ -0.25
RANBP3-229ENST00000592771 A0A0A6YYD5 115 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 LOC100506127A0A0U1RQW1 187 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 A6NCN8 305 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 LRIT2A6NDA9 550 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 ASNA1O43681 348 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 TMPRSS11DO60235 418 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 PDE9AO76083 593 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 IGLV3-19P01714 112 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 ENDOUP21128 410 aaKnown RBP13.48□□□□□ -0.25
RANBP3-229ENST00000592771 CD72P21854 359 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 GRK5P34947 590 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 HOXD12P35452 270 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 AHRP35869 848 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 BCL6P41182 706 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 OR1E2P47887 323 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 DSTNP60981 165 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 YPEL5P62699 121 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 HEPACAMQ14CZ8 416 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 SLC5A12Q1EHB4 618 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 CCDC92Q53HC0 331 aaPredicted RBP13.48□□□□□ -0.25
RANBP3-229ENST00000592771 TMEM201Q5SNT2 666 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 PTCHD4Q6ZW05 846 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 RNF130Q86XS8 419 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 DEFB123Q8N688 67 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 OR9Q2Q8NGE9 314 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 SETD6Q8TBK2 473 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 CDX2Q99626 313 aaPredicted RBP13.48□□□□□ -0.25
RANBP3-229ENST00000592771 CTRCQ99895 268 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 TAPBPLQ9BX59 468 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 POLE4Q9NR33 117 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 SPHK1Q9NYA1 384 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 OR6C2Q9NZP2 312 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 USP36Q9P275 1121 aaKnown RBP13.48□□□□□ -0.25
RANBP3-229ENST00000592771 MGAT4BQ9UQ53 548 aa13.48□□□□□ -0.25
RANBP3-229ENST00000592771 PCDH17O14917 1159 aa13.47□□□□□ -0.25
RANBP3-229ENST00000592771 SCAMP1O15126 338 aa13.47□□□□□ -0.25
RANBP3-229ENST00000592771 PRAMEF10O60809 474 aa13.47□□□□□ -0.25
RANBP3-229ENST00000592771 DLGAP3O95886 979 aa13.47□□□□□ -0.25
RANBP3-229ENST00000592771 GSSP48637 474 aa13.47□□□□□ -0.25
RANBP3-229ENST00000592771 ARFIP1P53367 373 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms