RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 YIPF1Q9Y548 306 aa17.02■□□□□ 0.31
SPC24-206ENST00000592540 SOD1P00441 154 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 C1GALT1C1LP0DN25 315 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 CDK5Q00535 292 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 MEF2AQ02078 507 aaPredicted RBP17.01■□□□□ 0.31
SPC24-206ENST00000592540 CD300LDQ6UXZ3 194 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 HSD11B1LQ7Z5J1 315 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 ZER1Q7Z7L7 766 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 DNAJA4Q8WW22 397 aaPredicted RBP17.01■□□□□ 0.31
SPC24-206ENST00000592540 WDR34Q96EX3 536 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 DCLRE1CQ96SD1 692 aaKnown RBP17.01■□□□□ 0.31
SPC24-206ENST00000592540 SORBS1Q9BX66 1292 aaKnown RBP17.01■□□□□ 0.31
SPC24-206ENST00000592540 CPEB1Q9BZB8 566 aaKnown RBP17.01■□□□□ 0.31
SPC24-206ENST00000592540 ELAC1Q9H777 363 aaKnown RBP17.01■□□□□ 0.31
SPC24-206ENST00000592540 FBXW2Q9UKT8 454 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 MTCL1Q9Y4B5 1905 aaKnown RBP17.01■□□□□ 0.31
SPC24-206ENST00000592540 SLC5A10A0PJK1 596 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 B8ZZF3 427 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 EPHX1P07099 455 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 POU3F3P20264 500 aaPredicted RBP17.01■□□□□ 0.31
SPC24-206ENST00000592540 PDHA2P29803 388 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 CD79BP40259 229 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 IDO2Q6ZQW0 420 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 LMNTD1Q8N9Z9 388 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 FIBINQ8TAL6 211 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 AP2M1Q96CW1 435 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 FAM83CQ9BQN1 747 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 ARHGAP9Q9BRR9 750 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 SPNS1Q9H2V7 528 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 DYRK1BQ9Y463 629 aa17.01■□□□□ 0.31
SPC24-206ENST00000592540 OBSL1O75147 1896 aa17■□□□□ 0.31
SPC24-206ENST00000592540 IRGMA1A4Y4 181 aa17■□□□□ 0.31
SPC24-206ENST00000592540 CACNB4O00305 520 aaPredicted RBP17■□□□□ 0.31
SPC24-206ENST00000592540 PRODHO43272 600 aa17■□□□□ 0.31
SPC24-206ENST00000592540 LIMS3P0CW19 117 aa17■□□□□ 0.31
SPC24-206ENST00000592540 LIMS4P0CW20 117 aa17■□□□□ 0.31
SPC24-206ENST00000592540 OR12D1P0DN82 309 aa17■□□□□ 0.31
SPC24-206ENST00000592540 AGFG1P52594 562 aaKnown RBP17■□□□□ 0.31
SPC24-206ENST00000592540 CTBP2P56545 445 aa17■□□□□ 0.31
SPC24-206ENST00000592540 ZBTB37Q5TC79 503 aa17■□□□□ 0.31
SPC24-206ENST00000592540 ZNF57Q68EA5 555 aaPredicted RBP17■□□□□ 0.31
SPC24-206ENST00000592540 TXNDC8Q6A555 127 aa17■□□□□ 0.31
SPC24-206ENST00000592540 HIST2H2AA3Q6FI13 130 aa17■□□□□ 0.31
SPC24-206ENST00000592540 KIAA1211LQ6NV74 962 aa17■□□□□ 0.31
SPC24-206ENST00000592540 Q6ZVL8 140 aa17■□□□□ 0.31
SPC24-206ENST00000592540 IKBIPQ70UQ0 350 aa17■□□□□ 0.31
SPC24-206ENST00000592540 OR4K5Q8NGD3 323 aa17■□□□□ 0.31
SPC24-206ENST00000592540 OR8H1Q8NGG4 311 aa17■□□□□ 0.31
SPC24-206ENST00000592540 CREB3L1Q96BA8 519 aa17■□□□□ 0.31
SPC24-206ENST00000592540 FOPNLQ96NB1 174 aa17■□□□□ 0.31
SPC24-206ENST00000592540 GPA33Q99795 319 aa17■□□□□ 0.31
SPC24-206ENST00000592540 WACQ9BTA9 647 aa17■□□□□ 0.31
SPC24-206ENST00000592540 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17■□□□□ 0.31
SPC24-206ENST00000592540 NARFLQ9H6Q4 476 aa17■□□□□ 0.31
SPC24-206ENST00000592540 SYNDIG1Q9H7V2 258 aa17■□□□□ 0.31
SPC24-206ENST00000592540 SLAMF7Q9NQ25 335 aa17■□□□□ 0.31
SPC24-206ENST00000592540 SEC14L3Q9UDX4 400 aa17■□□□□ 0.31
SPC24-206ENST00000592540 EXOSC1Q9Y3B2 195 aaKnown RBP17■□□□□ 0.31
SPC24-206ENST00000592540 SPEF1Q9Y4P9 236 aa17■□□□□ 0.31
SPC24-206ENST00000592540 A0A1W2PRQ8 180 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 ANHXE9PGG2 379 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 TSC22D2O75157 780 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 SOX18P35713 384 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 LSM11P83369 360 aaKnown RBP eCLIP16.99■□□□□ 0.31
SPC24-206ENST00000592540 NDUFA9Q16795 377 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 DNAJB7Q7Z6W7 309 aaPredicted RBP16.99■□□□□ 0.31
SPC24-206ENST00000592540 NATD1Q8N6N6 113 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 RASGEF1AQ8N9B8 481 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 OR4M2Q8NGB6 313 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 ZNF461Q8TAF7 563 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 SLC28A3Q9HAS3 691 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 MYOFQ9NZM1 2061 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 SHISA3A0PJX4 238 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 SH3BP5O60239 455 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 POP4O95707 220 aaKnown RBP16.99■□□□□ 0.31
SPC24-206ENST00000592540 LALBAP00709 142 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 ETV3P41162 512 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 MTNR1AP48039 350 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 SMSP52788 366 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 ARHGEF6Q15052 776 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 UAP1L1Q3KQV9 507 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 TOR2AQ5JU69 321 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 MZT2AQ6P582 158 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 ZNF782Q6ZMW2 699 aaPredicted RBP16.99■□□□□ 0.31
SPC24-206ENST00000592540 SHFQ7M4L6 423 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 IQCHQ86VS3 1027 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 ARIH2OSQ8N7S6 290 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 CHST14Q8NCH0 376 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 ZNF485Q8NCK3 441 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 SLC9A6Q92581 669 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 MARVELD3Q96A59 401 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 ZNF607Q96SK3 696 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 TMEM175Q9BSA9 504 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 RIOK2Q9BVS4 552 aaKnown RBP16.99■□□□□ 0.31
SPC24-206ENST00000592540 PHF11Q9UIL8 331 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 BACE2Q9Y5Z0 518 aa16.99■□□□□ 0.31
SPC24-206ENST00000592540 NUP210Q8TEM1 1887 aaPredicted RBP16.99■□□□□ 0.31
SPC24-206ENST00000592540 QSOX1O00391 747 aa16.98■□□□□ 0.31
SPC24-206ENST00000592540 HMGN4O00479 90 aa16.98■□□□□ 0.31
SPC24-206ENST00000592540 FABP7O15540 132 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms