RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 PRICKLE4Q2TBC4 344 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 C6orf163Q5TEZ5 329 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 HLA-DQA1Q5Y7H0 255 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 PAOXQ6QHF9 649 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 DND1Q8IYX4 353 aaKnown RBP12.78□□□□□ -0.36
APOC1-208ENST00000592535 TAGAPQ8N103 731 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 FBXW8Q8N3Y1 598 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 GBP7Q8N8V2 638 aaPredicted RBP12.78□□□□□ -0.36
APOC1-208ENST00000592535 OR5M3Q8NGP4 307 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 ADIPOR1Q96A54 375 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 TP53INP1Q96A56 240 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 MARVELD3Q96A59 401 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 KLHL29Q96CT2 875 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 CCDC126Q96EE4 140 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 CNRIP1Q96F85 164 aaPredicted RBP12.78□□□□□ -0.36
APOC1-208ENST00000592535 APIPQ96GX9 242 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 FAIM2Q9BWQ8 316 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 BRINP2Q9C0B6 783 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 ANKZF1Q9H8Y5 726 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 PPCSQ9HAB8 311 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 PROK2Q9HC23 129 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 MID1IP1Q9NPA3 183 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 MAT2BQ9NZL9 334 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 MCM8Q9UJA3 840 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 CNOT11Q9UKZ1 510 aaKnown RBP12.78□□□□□ -0.36
APOC1-208ENST00000592535 DTX4Q9Y2E6 619 aa12.78□□□□□ -0.36
APOC1-208ENST00000592535 CHCHD2Q9Y6H1 151 aaPredicted RBP12.78□□□□□ -0.36
APOC1-208ENST00000592535 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.78□□□□□ -0.36
APOC1-208ENST00000592535 ATP6AP2A0A1C7CYW4 349 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 NPIPA2E9PIF3 369 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 NPIPA3F8WFD2 350 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 HNRNPRO43390 633 aaKnown RBP12.77□□□□□ -0.37
APOC1-208ENST00000592535 PCDH7O60245 1069 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 ATP6AP2O75787 350 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 IGHG3P01860 377 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 ATP1B1P05026 303 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 IL3P08700 152 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 CSNK2A2P19784 350 aaPredicted RBP12.77□□□□□ -0.37
APOC1-208ENST00000592535 GPX3P22352 226 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 CRHR1P34998 444 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 SOX18P35713 384 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 KCNJ2P63252 427 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 BTKQ06187 659 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 MAP4K2Q12851 820 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 DUSP8Q13202 625 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 LTB4RQ15722 352 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 NTRK2Q16620 822 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 ZNF630Q2M218 657 aaPredicted RBP12.77□□□□□ -0.37
APOC1-208ENST00000592535 CCDC153Q494R4 210 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 EMC4Q5J8M3 183 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 TRILQ7L0X0 811 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 EID3Q8N140 333 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 VWA5B2Q8N398 1253 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 MARVELD2Q8N4S9 558 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 SIMC1Q8NDZ2 872 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 ADCY4Q8NFM4 1077 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 OR7G1Q8NGA0 311 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.77□□□□□ -0.37
APOC1-208ENST00000592535 ZNF681Q96N22 645 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 RYDENQ9NUL5 291 aaKnown RBP12.77□□□□□ -0.37
APOC1-208ENST00000592535 CNIH4Q9P003 139 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 GRID1Q9ULK0 1009 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 DLGAP4Q9Y2H0 992 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 NPFFR2Q9Y5X5 522 aa12.77□□□□□ -0.37
APOC1-208ENST00000592535 GNG14A0A1W2PPG7 69 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 LRRC3CA6NJW4 275 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 COPEO14579 308 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 CDH16O75309 829 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 CLDN14O95500 239 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 RFPL3SP0C7P2 107 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 KRT4P19013 534 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 TIA1P31483 386 aaKnown RBP eCLIP12.76□□□□□ -0.37
APOC1-208ENST00000592535 CCT5P48643 541 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 NAGLUP54802 743 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 FBXW4P57775 412 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 ACSM2AQ08AH3 577 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 EXOSC7Q15024 291 aaKnown RBP12.76□□□□□ -0.37
APOC1-208ENST00000592535 RPS6KA2Q15349 733 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 NNATQ16517 81 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 SPIN4Q56A73 249 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 ACSM2BQ68CK6 577 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 FRMD7Q6ZUT3 714 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 PRR22Q8IZ63 422 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 C4orf33Q8N1A6 199 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 LRRC25Q8N386 305 aaPredicted RBP12.76□□□□□ -0.37
APOC1-208ENST00000592535 RPRMLQ8N4K4 120 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 CCDC63Q8NA47 563 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 OR2W6PQ8NHA6 318 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 C16orf78Q8WTQ4 265 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 DIO2Q92813 273 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 SMC6Q96SB8 1091 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 EBPLQ9BY08 206 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 NXF5Q9H1B4 397 aaKnown RBP12.76□□□□□ -0.37
APOC1-208ENST00000592535 TP63Q9H3D4 680 aaPredicted RBP12.76□□□□□ -0.37
APOC1-208ENST00000592535 ZNF703Q9H7S9 590 aaPredicted RBP12.76□□□□□ -0.37
APOC1-208ENST00000592535 TNFRSF12AQ9NP84 129 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 PNPLA3Q9NST1 481 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 TNFRSF10DQ9UBN6 386 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 BCAP29Q9UHQ4 241 aa12.76□□□□□ -0.37
APOC1-208ENST00000592535 ZNF639Q9UID6 485 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms