RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 NHSL2Q5HYW2 709 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 TTC19Q6DKK2 380 aaPredicted RBP17.31■□□□□ 0.36
CCDC43-205ENST00000592333 CNPY4Q8N129 248 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 METTL4Q8N3J2 472 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 OR52B6Q8NGF0 335 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 NTNG2Q96CW9 530 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 LRRC1Q9BTT6 524 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 C1QTNF3Q9BXJ4 246 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 UBQLN3Q9H347 655 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 BRF2Q9HAW0 419 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 NINJ2Q9NZG7 142 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 ZNF629Q9UEG4 869 aaPredicted RBP17.31■□□□□ 0.36
CCDC43-205ENST00000592333 ZNF180Q9UJW8 692 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 PCTPQ9UKL6 214 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 PSME2Q9UL46 239 aa17.31■□□□□ 0.36
CCDC43-205ENST00000592333 ESYT3A0FGR9 886 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 WASHC1A8K0Z3 465 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 SYT5O00445 386 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 DVL2O14641 736 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 PGRMC2O15173 223 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 OTCP00480 354 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 CPMP14384 443 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 PORP16435 677 aaPredicted RBP17.3■□□□□ 0.36
CCDC43-205ENST00000592333 GDF1P27539 372 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 SSTR4P31391 388 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 ARL1P40616 181 aaPredicted RBP17.3■□□□□ 0.36
CCDC43-205ENST00000592333 SLC7A5Q01650 507 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 TRAF3Q13114 568 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 MYBPHQ13203 477 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 FBXL19-AS1Q494R0 122 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 CCNYL2Q5T2Q4 361 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 ARSKQ6UWY0 536 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 LACC1Q8IV20 430 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 PLD6Q8N2A8 252 aaKnown RBP17.3■□□□□ 0.36
CCDC43-205ENST00000592333 NINJ1Q92982 152 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 MRRFQ96E11 262 aaKnown RBP17.3■□□□□ 0.36
CCDC43-205ENST00000592333 PHF21BQ96EK2 531 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 TMEM41AQ96HV5 264 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 JSRP1Q96MG2 331 aaPredicted RBP17.3■□□□□ 0.36
CCDC43-205ENST00000592333 MRPL57Q9BQC6 102 aaKnown RBP17.3■□□□□ 0.36
CCDC43-205ENST00000592333 ELOVL6Q9H5J4 265 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 ALKBH4Q9NXW9 302 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 FETUBQ9UGM5 382 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 EDARQ9UNE0 448 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 L3MBTL1Q9Y468 752 aa17.3■□□□□ 0.36
CCDC43-205ENST00000592333 ZWINTO95229 277 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 ATP1B1P05026 303 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 KLK1P06870 262 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 CEACAM8P31997 349 aaPredicted RBP17.29■□□□□ 0.36
CCDC43-205ENST00000592333 DCAF7P61962 342 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 TRA2BP62995 288 aaKnown RBP17.29■□□□□ 0.36
CCDC43-205ENST00000592333 CRYZQ08257 329 aaKnown RBP17.29■□□□□ 0.36
CCDC43-205ENST00000592333 MAP4K2Q12851 820 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 DUSP8Q13202 625 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 SNTA1Q13424 505 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 SLC48A1Q6P1K1 146 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 MILR1Q7Z6M3 343 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 TMEM200AQ86VY9 491 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 LIX1LQ8IVB5 337 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 HSPBAP1Q96EW2 488 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 RILPQ96NA2 401 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 CDK15Q96Q40 435 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 TIMP4Q99727 224 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 PRDM14Q9GZV8 571 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 SLC6A15Q9H2J7 730 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 MRPL46Q9H2W6 279 aaKnown RBP17.29■□□□□ 0.36
CCDC43-205ENST00000592333 ZBTB26Q9HCK0 441 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 TEX10Q9NXF1 929 aaPredicted RBP17.29■□□□□ 0.36
CCDC43-205ENST00000592333 XPR1Q9UBH6 696 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 CES1P1Q9UKY3 287 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 SNX6Q9UNH7 406 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 PCDHA9Q9Y5H5 950 aa17.29■□□□□ 0.36
CCDC43-205ENST00000592333 SPG11Q96JI7 2443 aa17.28■□□□□ 0.36
CCDC43-205ENST00000592333 ACOX3O15254 700 aa17.28■□□□□ 0.36
CCDC43-205ENST00000592333 RPS17P08708 135 aaKnown RBP17.28■□□□□ 0.36
CCDC43-205ENST00000592333 CSNK2A2P19784 350 aaPredicted RBP17.28■□□□□ 0.36
CCDC43-205ENST00000592333 S1PR1P21453 382 aa17.28■□□□□ 0.36
CCDC43-205ENST00000592333 CASP3P42574 277 aa17.28■□□□□ 0.36
CCDC43-205ENST00000592333 CDK9P50750 372 aaKnown RBP17.28■□□□□ 0.36
CCDC43-205ENST00000592333 MAPK12P53778 367 aa17.28■□□□□ 0.36
CCDC43-205ENST00000592333 PSPHP78330 225 aa17.28■□□□□ 0.36
CCDC43-205ENST00000592333 WHAMMP3Q1A5X7 153 aa17.28■□□□□ 0.36
CCDC43-205ENST00000592333 VASNQ6EMK4 673 aa17.28■□□□□ 0.36
CCDC43-205ENST00000592333 NUP54Q7Z3B4 507 aa17.28■□□□□ 0.36
CCDC43-205ENST00000592333 LCA5Q86VQ0 697 aa17.28■□□□□ 0.36
CCDC43-205ENST00000592333 C15orf41Q9Y2V0 281 aa17.28■□□□□ 0.36
CCDC43-205ENST00000592333 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.28■□□□□ 0.36
CCDC43-205ENST00000592333 C15orf38-AP3S2A0A0A6YYH1 394 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 FAM221AA4D161 298 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 CTAG2O75638 210 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 IL2RAP01589 272 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 GBAP04062 536 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 CT62P0C5K7 136 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 RHOXF2BP0C7M4 288 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 HSD3B1P14060 373 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 KRT15P19012 456 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 NT5EP21589 574 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 GPX3P22352 226 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 HSD3B2P26439 372 aa17.27■□□□□ 0.36
CCDC43-205ENST00000592333 ABCD3P28288 659 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms