RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 SCUBE1Q8IWY4 988 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 B3GNT7Q8NFL0 401 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 OR2T11Q8NH01 316 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 TANKQ92844 425 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 TMEM125Q96AQ2 219 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 FCRL1Q96LA6 429 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 DEFB126Q9BYW3 111 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 CCDC134Q9H6E4 229 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 WDR41Q9HAD4 459 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 MEAF6Q9HAF1 191 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 FBXW2Q9UKT8 454 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 ATG4BQ9Y4P1 393 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 PTGDR2Q9Y5Y4 395 aa16.68■□□□□ 0.26
VAT1-208ENST00000590924 FBN2P35556 2912 aa16.67■□□□□ 0.26
VAT1-208ENST00000590924 INTS1Q8N201 2190 aaKnown RBP16.67■□□□□ 0.26
VAT1-208ENST00000590924 PCDH7O60245 1069 aa16.67■□□□□ 0.26
VAT1-208ENST00000590924 CTNSO60931 367 aa16.67■□□□□ 0.26
VAT1-208ENST00000590924 SKAP2O75563 359 aaPredicted RBP16.67■□□□□ 0.26
VAT1-208ENST00000590924 TGDSO95455 350 aa16.67■□□□□ 0.26
VAT1-208ENST00000590924 PCSK2P16519 638 aa16.67■□□□□ 0.26
VAT1-208ENST00000590924 MDH1P40925 334 aaKnown RBP16.67■□□□□ 0.26
VAT1-208ENST00000590924 CLCN2P51788 898 aa16.67■□□□□ 0.26
VAT1-208ENST00000590924 SMSP52788 366 aa16.67■□□□□ 0.26
VAT1-208ENST00000590924 HNRNPH2P55795 449 aaKnown RBP16.67■□□□□ 0.26
VAT1-208ENST00000590924 TNFRSF17Q02223 184 aa16.67■□□□□ 0.26
VAT1-208ENST00000590924 MAD2L1Q13257 205 aaPredicted RBP16.67■□□□□ 0.26
VAT1-208ENST00000590924 ATP6AP1LQ52LC2 224 aa16.67■□□□□ 0.26
VAT1-208ENST00000590924 GDF7Q7Z4P5 450 aa16.67■□□□□ 0.26
VAT1-208ENST00000590924 WDR75Q8IWA0 830 aaKnown RBP16.67■□□□□ 0.26
VAT1-208ENST00000590924 CHERPQ8IWX8 916 aaKnown RBP16.67■□□□□ 0.26
VAT1-208ENST00000590924 CPSF7Q8N684 471 aaKnown RBP16.67■□□□□ 0.26
VAT1-208ENST00000590924 POGLUT1Q8NBL1 392 aa16.67■□□□□ 0.26
VAT1-208ENST00000590924 TM4SF18Q96CE8 201 aa16.67■□□□□ 0.26
VAT1-208ENST00000590924 C3orf30Q96M34 536 aa16.67■□□□□ 0.26
VAT1-208ENST00000590924 PPIEQ9UNP9 301 aaKnown RBP16.67■□□□□ 0.26
VAT1-208ENST00000590924 KLF13Q9Y2Y9 288 aaPredicted RBP16.67■□□□□ 0.26
VAT1-208ENST00000590924 MEMO1Q9Y316 297 aa16.67■□□□□ 0.26
VAT1-208ENST00000590924 TRBV11-1A0A0K0K1C0 115 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 GNG14A0A1W2PPG7 69 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 A0A1W2PR48 441 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 A8MUA0 341 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 GBAP04062 536 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 ANXA4P09525 319 aaPredicted RBP16.66■□□□□ 0.26
VAT1-208ENST00000590924 DRD2P14416 443 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 ABOP16442 354 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 MAPK1P28482 360 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 PPP2R1BP30154 601 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 PDCD2Q16342 344 aaPredicted RBP16.66■□□□□ 0.26
VAT1-208ENST00000590924 RFTN2Q52LD8 501 aaPredicted RBP16.66■□□□□ 0.26
VAT1-208ENST00000590924 RNFT1Q5M7Z0 435 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 C6orf136Q5SQH8 315 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.66■□□□□ 0.26
VAT1-208ENST00000590924 TUBGCP3Q96CW5 907 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 FAIM2Q9BWQ8 316 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 RPF2Q9H7B2 306 aaKnown RBP16.66■□□□□ 0.26
VAT1-208ENST00000590924 SLCO1B3Q9NPD5 702 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 PRTFDC1Q9NRG1 225 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 CLDN16Q9Y5I7 305 aa16.66■□□□□ 0.26
VAT1-208ENST00000590924 DCHS2Q6V1P9 2916 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 C1orf226A1L170 272 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 PEX11AO75192 247 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 JUNP05412 331 aaKnown RBP16.65■□□□□ 0.26
VAT1-208ENST00000590924 NR2F6P10588 404 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 COX6B1P14854 86 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 EMX2Q04743 252 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 ZNF763Q0D2J5 394 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 SERTAD2Q14140 314 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 HEPACAMQ14CZ8 416 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 NDUFAF5Q5TEU4 345 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 IKBIPQ70UQ0 350 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 FAM47BQ8NA70 645 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 C16orf78Q8WTQ4 265 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 PHF10Q8WUB8 498 aaKnown RBP16.65■□□□□ 0.26
VAT1-208ENST00000590924 VMP1Q96GC9 406 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 CSF3RQ99062 836 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 NUF2Q9BZD4 464 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 AKTIPQ9H8T0 292 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 ADAP2Q9NPF8 381 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 ASIC5Q9NY37 505 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 ZNF223Q9UK11 482 aaPredicted RBP16.65■□□□□ 0.26
VAT1-208ENST00000590924 PSME2Q9UL46 239 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 PCDHA9Q9Y5H5 950 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 PDZD2O15018 2839 aa16.65■□□□□ 0.26
VAT1-208ENST00000590924 ADGRG4Q8IZF6 3080 aa16.64■□□□□ 0.25
VAT1-208ENST00000590924 CSMD2Q7Z408 3487 aa16.64■□□□□ 0.25
VAT1-208ENST00000590924 ATP6AP2A0A1C7CYW4 349 aa16.64■□□□□ 0.25
VAT1-208ENST00000590924 E9PLN8 166 aa16.64■□□□□ 0.25
VAT1-208ENST00000590924 TGFBR3LH3BV60 316 aa16.64■□□□□ 0.25
VAT1-208ENST00000590924 ZNF195O14628 629 aa16.64■□□□□ 0.25
VAT1-208ENST00000590924 EDF1O60869 148 aaKnown RBP16.64■□□□□ 0.25
VAT1-208ENST00000590924 ITGA10O75578 1167 aa16.64■□□□□ 0.25
VAT1-208ENST00000590924 ATP6AP2O75787 350 aa16.64■□□□□ 0.25
VAT1-208ENST00000590924 CLDN14O95500 239 aa16.64■□□□□ 0.25
VAT1-208ENST00000590924 KITP10721 976 aa16.64■□□□□ 0.25
VAT1-208ENST00000590924 PRPS2P11908 318 aa16.64■□□□□ 0.25
VAT1-208ENST00000590924 ALOX15P16050 662 aaPredicted RBP16.64■□□□□ 0.25
VAT1-208ENST00000590924 ELAVL4P26378 380 aaKnown RBP16.64■□□□□ 0.25
VAT1-208ENST00000590924 MEOX1P50221 254 aa16.64■□□□□ 0.25
VAT1-208ENST00000590924 GPR143P51810 404 aa16.64■□□□□ 0.25
VAT1-208ENST00000590924 HNRNPFP52597 415 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms