RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 PORP16435 677 aaPredicted RBP15.5■□□□□ 0.07
GCDH-213ENST00000590627 CALB2P22676 271 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 GALNSP34059 522 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 MPIP34949 423 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 TRPC1P48995 793 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 EFNA3P52797 238 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 BNIP1Q12981 228 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 MINDY4Q4G0A6 757 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 OR4N5Q8IXE1 308 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 LRRC25Q8N386 305 aaPredicted RBP15.5■□□□□ 0.07
GCDH-213ENST00000590627 DNAJB8Q8NHS0 232 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 GOT1L1Q8NHS2 421 aaPredicted RBP15.5■□□□□ 0.07
GCDH-213ENST00000590627 ZFP28Q8NHY6 868 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 PSMA8Q8TAA3 256 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 PTCHD1Q96NR3 888 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 BBS4Q96RK4 519 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 PELOQ9BRX2 385 aaKnown RBP15.5■□□□□ 0.07
GCDH-213ENST00000590627 EFCAB1Q9HAE3 211 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 MAP10Q9P2G4 905 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 MKL2Q9ULH7 1088 aa15.5■□□□□ 0.07
GCDH-213ENST00000590627 FARSAQ9Y285 508 aaKnown RBP15.5■□□□□ 0.07
GCDH-213ENST00000590627 TCRBV16S1A1N1A0A5B0 115 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 IDSB3KWA1 339 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 DNAJB5O75953 348 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 NPPAP01160 153 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 ATP1B1P05026 303 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 IFI6P09912 130 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 C8orf89P0DMQ9 161 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 ESRRAP11474 423 aaPredicted RBP15.49■□□□□ 0.07
GCDH-213ENST00000590627 MAOAP21397 527 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 FEN1P39748 380 aaKnown RBP15.49■□□□□ 0.07
GCDH-213ENST00000590627 MANFP55145 182 aaKnown RBP15.49■□□□□ 0.07
GCDH-213ENST00000590627 RPS18P62269 152 aaKnown RBP15.49■□□□□ 0.07
GCDH-213ENST00000590627 ID2Q02363 134 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 DUSP2Q05923 314 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 STX4Q12846 297 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 ZNF750Q32MQ0 723 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 MMEL1Q495T6 779 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 PAGE3Q5JUK9 113 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 LRIF1Q5T3J3 769 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 REP15Q6BDI9 236 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 FAM180BQ6P0A1 224 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 SLC2A7Q6PXP3 512 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 HACD2Q6Y1H2 254 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 CCDC116Q8IYX3 515 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 ST13P4Q8IZP2 240 aaPredicted RBP15.49■□□□□ 0.07
GCDH-213ENST00000590627 PCYOX1LQ8NBM8 494 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 GALNT11Q8NCW6 608 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 OR2Y1Q8NGV0 311 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 RCN3Q96D15 328 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 PHF12Q96QT6 1004 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 ALOXE3Q9BYJ1 711 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 GLIPR2Q9H4G4 154 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 NECTIN3Q9NQS3 549 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 ERVK-11Q9UQG0 969 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 PADI2Q9Y2J8 665 aa15.49■□□□□ 0.07
GCDH-213ENST00000590627 NBPF19A0A087WUL8 3843 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 A0A096LPI6 279 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 A0A1W2PS29 197 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 OR2W5A6NFC9 320 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 TTLL8A6PVC2 850 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 RFXANKO14593 260 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 MRASO14807 208 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 PCDH17O14917 1159 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 ERN1O75460 977 aaKnown RBP15.48■□□□□ 0.07
GCDH-213ENST00000590627 SLITRK5O94991 958 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 C6orf47O95873 294 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 HEXBP07686 556 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 ZCCHC18P0CG32 403 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 ATXN8OSP0DMR3 200 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 PTPN6P29350 595 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 STT3AP46977 705 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 PGDP52209 483 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 NCBP2P52298 156 aaKnown RBP eCLIP15.48■□□□□ 0.07
GCDH-213ENST00000590627 EMP2P54851 167 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 HBA1P69905 142 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 NSDHLQ15738 373 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 MFSD4BQ5TF39 518 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 DLEU7Q6UYE1 221 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 ZNF551Q7Z340 670 aaPredicted RBP15.48■□□□□ 0.07
GCDH-213ENST00000590627 ANKRD46Q86W74 232 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 PRSS58Q8IYP2 241 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 CLECL1Q8IZS7 167 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 ENDOVQ8N8Q3 282 aaKnown RBP15.48■□□□□ 0.07
GCDH-213ENST00000590627 ZNF675Q8TD23 568 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 ING2Q9H160 280 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 SOX17Q9H6I2 414 aaPredicted RBP15.48■□□□□ 0.07
GCDH-213ENST00000590627 NEUROD4Q9HD90 331 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 TAS2R9Q9NYW1 312 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 C3orf18Q9UK00 162 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 VPS4AQ9UN37 437 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 PCDHGB4Q9UN71 923 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 PCDHGB7Q9Y5F8 929 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 NUP210LQ5VU65 1888 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 MED13Q9UHV7 2174 aa15.48■□□□□ 0.07
GCDH-213ENST00000590627 TNRC6AQ8NDV7 1962 aaKnown RBP15.47■□□□□ 0.07
GCDH-213ENST00000590627 HNRNPCL1O60812 293 aaKnown RBP15.47■□□□□ 0.07
GCDH-213ENST00000590627 ALOX12BO75342 701 aa15.47■□□□□ 0.07
GCDH-213ENST00000590627 UTP20O75691 2785 aaKnown RBP15.47■□□□□ 0.07
GCDH-213ENST00000590627 ATP5HO75947 161 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms