RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 OTCP00480 354 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 RPS17P08708 135 aaKnown RBP11.22□□□□□ -0.61
VAT1-206ENST00000589709 CPMP14384 443 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 PORP16435 677 aaPredicted RBP11.22□□□□□ -0.61
VAT1-206ENST00000589709 NAGAP17050 411 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 ENDOUP21128 410 aaKnown RBP11.22□□□□□ -0.61
VAT1-206ENST00000589709 ECHS1P30084 290 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 TMED10P49755 219 aaKnown RBP11.22□□□□□ -0.61
VAT1-206ENST00000589709 RPS6KA2Q15349 733 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 CCNYL2Q5T2Q4 361 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 RIPPLY2Q5TAB7 128 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 HLA-DQA1Q5Y7H0 255 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 TMEM198Q66K66 360 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 CLYBLQ8N0X4 340 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 OR4F6Q8NGB9 312 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 NEIL3Q8TAT5 605 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 SPPL2AQ8TCT8 520 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 ZNF483Q8TF39 744 aaPredicted RBP11.22□□□□□ -0.61
VAT1-206ENST00000589709 DCAKDQ8WVC6 231 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 DIO2Q92813 273 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 ADIPOR1Q96A54 375 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 NTNG2Q96CW9 530 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 NSUN5Q96P11 429 aaKnown RBP11.22□□□□□ -0.61
VAT1-206ENST00000589709 DOHHQ9BU89 302 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 ANGPTL4Q9BY76 406 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 MRPL1Q9BYD6 325 aaKnown RBP11.22□□□□□ -0.61
VAT1-206ENST00000589709 OR10A5Q9H207 317 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 ELOVL6Q9H5J4 265 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 EXO5Q9H790 373 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 BRF2Q9HAW0 419 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 NMRK1Q9NWW6 199 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 Q9UFV3 132 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 CES1P1Q9UKY3 287 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 PCDHA9Q9Y5H5 950 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 AKAP9Q99996 3911 aa11.22□□□□□ -0.61
VAT1-206ENST00000589709 SPG11Q96JI7 2443 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 HCFC1P51610 2035 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 HIVEP1P15822 2718 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 A0A087WUV0 522 aaPredicted RBP11.21□□□□□ -0.61
VAT1-206ENST00000589709 UQCRHLA0A096LP55 91 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 C1orf226A1L170 272 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 AHRRA9YTQ3 701 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 TRIM49D1C9J1S8 452 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 POC1B-GALNT4F8VUJ3 575 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 DYNC1I1O14576 645 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 SNRPAP09012 282 aaKnown RBP11.21□□□□□ -0.61
VAT1-206ENST00000589709 SBK3P0C264 359 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 CT62P0C5K7 136 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 S1PR1P21453 382 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 ADH7P40394 386 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 MAPK12P53778 367 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 NRG3P56975 720 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 RPP38P78345 283 aaKnown RBP11.21□□□□□ -0.61
VAT1-206ENST00000589709 MAP4K2Q12851 820 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 TESK1Q15569 626 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 SLC25A35Q3KQZ1 300 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 LGSNQ5TDP6 509 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 SLC48A1Q6P1K1 146 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 COMMD6Q7Z4G1 85 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 CDH24Q86UP0 819 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 ULK2Q8IYT8 1036 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 LIX1Q8N485 282 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 NOA1Q8NC60 698 aaKnown RBP11.21□□□□□ -0.61
VAT1-206ENST00000589709 IFT81Q8WYA0 676 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 ZNF597Q96LX8 424 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 UBQLN3Q9H347 655 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 PSME2Q9UL46 239 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 SNX6Q9UNH7 406 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 SLC12A4Q9UP95 1085 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 CFL2Q9Y281 166 aa11.21□□□□□ -0.61
VAT1-206ENST00000589709 CSMD2Q7Z408 3487 aa11.21□□□□□ -0.62
VAT1-206ENST00000589709 NINQ8N4C6 2090 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 ANKRD17O75179 2603 aaKnown RBP11.2□□□□□ -0.62
VAT1-206ENST00000589709 A0A1B0GTL3 188 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 GOLGA6L10A6NI86 522 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 A8MT66 165 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 PPP6CO00743 305 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 CDH16O75309 829 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 PDYNP01213 254 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 ATP1B1P05026 303 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 HPNP05981 417 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 CSNK2A2P19784 350 aaPredicted RBP11.2□□□□□ -0.62
VAT1-206ENST00000589709 NT5EP21589 574 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 CDH13P55290 713 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 FBXW4P57775 412 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 TRA2BP62995 288 aaKnown RBP11.2□□□□□ -0.62
VAT1-206ENST00000589709 MGAT2Q10469 447 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 GALNT1Q10472 559 aaPredicted RBP11.2□□□□□ -0.62
VAT1-206ENST00000589709 SGO1Q5FBB7 561 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 C6orf163Q5TEZ5 329 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 FNDC7Q5VTL7 733 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 CES4AQ5XG92 561 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 LETMD1Q6P1Q0 360 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 TMEM81Q6P7N7 255 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 TMEM64Q6YI46 380 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 SPNS3Q6ZMD2 512 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 TIFABQ6ZNK6 161 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 PACS2Q86VP3 889 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 LCA5Q86VQ0 697 aa11.2□□□□□ -0.62
VAT1-206ENST00000589709 LIX1LQ8IVB5 337 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms