RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 WDYHV1Q96HA8 205 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 MS4A3Q96HJ5 214 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 ART5Q96L15 291 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 ATP6V1G3Q96LB4 118 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 BIRC8Q96P09 236 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 TNFRSF13CQ96RJ3 184 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 EGFL8Q99944 293 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 TMEM204Q9BSN7 226 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 MED18Q9BUE0 208 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 PLAC1Q9HBJ0 212 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 PRM3Q9NNZ6 103 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 KCNK9Q9NPC2 374 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 SACM1LQ9NTJ5 587 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 DCDC2Q9UHG0 476 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 RNF112Q9ULX5 631 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 TMCO1Q9UM00 188 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 SH2B3Q9UQQ2 575 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 LAMP3Q9UQV4 416 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 MTO1Q9Y2Z2 717 aaKnown RBP5.55□□□□□ -1.52
VPS25-204ENST00000589577 SUPT3HB4E1H0 165 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 H7BY64 318 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 GOLGA8RI6L899 631 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 MYO1CO00159 1063 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 TM9SF1O15321 606 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 KLF4O43474 513 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 SUPT3HO75486 399 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 ZFAND5O76080 213 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 KLHL2O95198 593 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 SYF2O95926 243 aaKnown RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 ALDOAP04075 364 aaKnown RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 P04436 131 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 C2P06681 752 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 THBDP07204 575 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 SOD3P08294 240 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 IGHV4-31P0DP07 118 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 PYGBP11216 843 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 GFAPP14136 432 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 JAK1P23458 1154 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 GABRB3P28472 473 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 HPDP32754 393 aaPredicted RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 UGT2B10P36537 528 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 HSD17B2P37059 387 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 PCYT1AP49585 367 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 COMPP49747 757 aaPredicted RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 CDKN2DP55273 166 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 AP1S2P56377 157 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 RPS4XP62701 263 aaKnown RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 MEF2AQ02078 507 aaPredicted RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 TSTA3Q13630 321 aaPredicted RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 ACAP2Q15057 778 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 ZKSCAN8Q15776 578 aaPredicted RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 MIDNQ504T8 468 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 PRAMEF20Q5VT98 475 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 HHATQ5VTY9 493 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 ZNF474Q6S9Z5 364 aaPredicted RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 PAQR3Q6TCH7 311 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 ADCK2Q7Z695 626 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 MTERF4Q7Z6M4 381 aaKnown RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 CMC1Q7Z7K0 106 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 ADGRE4PQ86SQ3 457 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 TRABD2AQ86V40 505 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 GPSM1Q86YR5 675 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 TRIM42Q8IWZ5 723 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 HOMEZQ8IX15 550 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 LRRC56Q8IYG6 542 aaPredicted RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 CPNE9Q8IYJ1 553 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 TCAIMQ8N3R3 496 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 ZNF321PQ8N8H1 164 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 FBXO15Q8NCQ5 510 aaPredicted RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 ZNF740Q8NDX6 193 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 LILRB1Q8NHL6 650 aaPredicted RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 CD200R1Q8TD46 325 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 INTS12Q96CB8 462 aaKnown RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 CCDC126Q96EE4 140 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 ZC3HAV1LQ96H79 300 aaKnown RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 APOPT1Q96IL0 206 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 PRAP1Q96NZ9 151 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 SLC30A3Q99726 388 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 MRPL57Q9BQC6 102 aaKnown RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 G6PC3Q9BUM1 346 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 DERL2Q9GZP9 239 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 PIGMQ9H3S5 423 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 CNOT10Q9H9A5 744 aaKnown RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 CAB39LQ9H9S4 337 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 CALHM2Q9HA72 323 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 TMBIM4Q9HC24 238 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 SSU72Q9NP77 194 aaKnown RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 ZFP64Q9NPA5 681 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 PRDM9Q9NQV7 894 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 QPCTLQ9NXS2 382 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 CD274Q9NZQ7 290 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 TSR3Q9UJK0 312 aaKnown RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 GDF2Q9UK05 429 aaPredicted RBP5.54□□□□□ -1.52
VPS25-204ENST00000589577 PACSIN3Q9UKS6 424 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 CAMK2AQ9UQM7 478 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 SLC22A7Q9Y694 548 aa5.54□□□□□ -1.52
VPS25-204ENST00000589577 C4orf51C9J302 202 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 E7ENX8 843 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 TCF21O43680 179 aa5.53□□□□□ -1.52
VPS25-204ENST00000589577 LCMT2O60294 686 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms