RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-209ENST00000589318 CRYZL1O95825 349 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 ABCB1P08183 1280 aaPredicted RBP14.54□□□□□ -0.08
DDX39A-209ENST00000589318 SMIM10L1P0DMW3 83 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 THRBP10828 461 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 NR4A1P22736 598 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 CERS1P27544 350 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 ELK4P28324 431 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 ALDH9A1P49189 494 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 PCBP4P57723 403 aaKnown RBP14.54□□□□□ -0.08
DDX39A-209ENST00000589318 SLAMF1Q13291 335 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 SIM2Q14190 667 aaPredicted RBP14.54□□□□□ -0.08
DDX39A-209ENST00000589318 SLC9A5Q14940 896 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 C6orf141Q5SZD1 244 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 NDUFAF5Q5TEU4 345 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 WDR5BQ86VZ2 330 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.54□□□□□ -0.08
DDX39A-209ENST00000589318 MAML2Q8IZL2 1156 aaPredicted RBP14.54□□□□□ -0.08
DDX39A-209ENST00000589318 OR4N4Q8N0Y3 316 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 SRFBP1Q8NEF9 429 aaKnown RBP14.54□□□□□ -0.08
DDX39A-209ENST00000589318 UTP15Q8TED0 518 aaKnown RBP14.54□□□□□ -0.08
DDX39A-209ENST00000589318 FIG4Q92562 907 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 TP53INP1Q96A56 240 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 CLIP3Q96DZ5 547 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 SMIM10Q96HG1 83 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 ADNPQ9H2P0 1102 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 TAS2R7Q9NYW3 318 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 ZNF221Q9UK13 617 aa14.54□□□□□ -0.08
DDX39A-209ENST00000589318 PI4KAP42356 2102 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 A0A1W2PR48 441 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 LILRA5A6NI73 299 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 WASHC1A8K0Z3 465 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 FAM25AB3EWG3 89 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 FAM25CB3EWG5 89 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 FAM25GB3EWG6 89 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 PRKRAO75569 313 aaKnown RBP14.53□□□□□ -0.08
DDX39A-209ENST00000589318 UBXN7O94888 489 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 CCDC159P0C7I6 412 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 SLC35G6P0C7Q6 338 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 ZNF888P0CJ79 500 aaPredicted RBP14.53□□□□□ -0.08
DDX39A-209ENST00000589318 ARSFP54793 590 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 COPZ1P61923 177 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 BNC1Q01954 994 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 RGS1Q08116 209 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 SRSF5Q13243 272 aaKnown RBP14.53□□□□□ -0.08
DDX39A-209ENST00000589318 IL18R1Q13478 541 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 CPZQ66K79 652 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 ZNF544Q6NX49 715 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 LYSMD2Q8IV50 215 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 ZZZ3Q8IYH5 903 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 FAM86B1Q8N7N1 296 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 AVL9Q8NBF6 648 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 ZNF555Q8NEP9 628 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 DYNC2LI1Q8TCX1 351 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 ZNF566Q969W8 418 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 DPH2Q9BQC3 489 aaPredicted RBP14.53□□□□□ -0.08
DDX39A-209ENST00000589318 ASPSCR1Q9BZE9 553 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 SLA2Q9H6Q3 261 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 ATG4BQ9Y4P1 393 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 SNX11Q9Y5W9 270 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 ARID1BQ8NFD5 2236 aaPredicted RBP14.53□□□□□ -0.08
DDX39A-209ENST00000589318 H0YGG7 62 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 HCRTR1O43613 425 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 CREG1O75629 220 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 PRSS23O95084 383 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 DRD2P14416 443 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 ST6GAL1P15907 406 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 ARF3P61204 181 aaPredicted RBP14.53□□□□□ -0.08
DDX39A-209ENST00000589318 RGNQ15493 299 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 RSBN1Q5VWQ0 802 aaPredicted RBP14.53□□□□□ -0.08
DDX39A-209ENST00000589318 PIWIL3Q7Z3Z3 882 aaKnown RBP14.53□□□□□ -0.08
DDX39A-209ENST00000589318 NETO1Q8TDF5 533 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 EDAQ92838 391 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 SDCCAG3Q96C92 435 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 NODALQ96S42 347 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 SLC35A5Q9BS91 424 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 MMP27Q9H306 513 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 CXorf36Q9H7Y0 433 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 ERVMER34-1Q9H9K5 563 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 TMEM74BQ9NUR3 256 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 EHD3Q9NZN3 535 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 ACSL6Q9UKU0 697 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 CABIN1Q9Y6J0 2220 aa14.53□□□□□ -0.08
DDX39A-209ENST00000589318 MYO15AQ9UKN7 3530 aa14.52□□□□□ -0.08
DDX39A-209ENST00000589318 GSTA4O15217 222 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 PDPK1O15530 556 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 CCNKO75909 580 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 RETP07949 1114 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 NUDT7P0C024 238 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 GIMD1P0DJR0 217 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 PRKCAP17252 672 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 PPIBP23284 216 aaKnown RBP14.52□□□□□ -0.09
DDX39A-209ENST00000589318 CTSKP43235 329 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 NR4A2P43354 598 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 CAPZBP47756 277 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 DEFA1P59665 94 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 DEFA3P59666 94 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 NKG7Q16617 165 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 VMACQ2NL98 169 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 COX20Q5RI15 118 aa14.52□□□□□ -0.09
DDX39A-209ENST00000589318 PMS2CLQ68D20 193 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms