RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 PHF12Q96QT6 1004 aa21.15■□□□□ 0.98
ACTN4-210ENST00000588618 SH3GL1Q99961 368 aa21.15■□□□□ 0.98
ACTN4-210ENST00000588618 ANKRA2Q9H9E1 313 aa21.15■□□□□ 0.98
ACTN4-210ENST00000588618 ZCCHC3Q9NUD5 404 aaKnown RBP21.15■□□□□ 0.98
ACTN4-210ENST00000588618 C15orf38-AP3S2A0A0A6YYH1 394 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 RNF103-CHMP3A0A140T963 221 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 A8MUA0 341 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 C17orf105B2RV13 164 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 PCDH17O14917 1159 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 IGHEP01854 428 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 SLC6A2P23975 617 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 PSME3P61289 254 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 PRICKLE4Q2TBC4 344 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 DNAL1Q4LDG9 190 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 ARPINQ7Z6K5 226 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 PGAM4Q8N0Y7 254 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 SIMC1Q8NDZ2 872 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 CNPPD1Q9BV87 410 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 CADM1Q9BY67 442 aaKnown RBP21.14■□□□□ 0.97
ACTN4-210ENST00000588618 CXorf21Q9HAI6 301 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 PTGFRNQ9P2B2 879 aa21.14■□□□□ 0.97
ACTN4-210ENST00000588618 ZFHX4Q86UP3 3567 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 EVPLLA8MZ36 301 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 PPIBP23284 216 aaKnown RBP21.13■□□□□ 0.97
ACTN4-210ENST00000588618 PRKAG1P54619 331 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 MGAT2Q10469 447 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 TBC1D25Q3MII6 688 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 ZNF628Q5EBL2 1059 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 RABL3Q5HYI8 236 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 NANOGP8Q6NSW7 305 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 TMEM64Q6YI46 380 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 ANKRD37Q7Z713 158 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 DTX1Q86Y01 620 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 C10orf111Q8N326 155 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 OR14A16Q8NHC5 309 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 ANKRD27Q96NW4 1050 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 NANOGQ9H9S0 305 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 GPN2Q9H9Y4 310 aaPredicted RBP21.13■□□□□ 0.97
ACTN4-210ENST00000588618 MAT2BQ9NZL9 334 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 PACSIN3Q9UKS6 424 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 L3MBTL1Q9Y468 752 aa21.13■□□□□ 0.97
ACTN4-210ENST00000588618 LOC101059948A0A1B0GTJ6 334 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 EMC8O43402 210 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 KRT75O95678 551 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 CT62P0C5K7 136 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 MTPNP58546 118 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 RPS18P62269 152 aaKnown RBP21.12■□□□□ 0.97
ACTN4-210ENST00000588618 TP53BP2Q13625 1128 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 ZNF267Q14586 743 aaPredicted RBP21.12■□□□□ 0.97
ACTN4-210ENST00000588618 SFT2D3Q587I9 215 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 RUNDC3AQ59EK9 446 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 OR56A1Q8NGH5 318 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 SFXN5Q8TD22 340 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 FAM120BQ96EK7 910 aaKnown RBP21.12■□□□□ 0.97
ACTN4-210ENST00000588618 ART5Q96L15 291 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 CPPED1Q9BRF8 314 aaPredicted RBP21.12■□□□□ 0.97
ACTN4-210ENST00000588618 THUMPD3Q9BV44 507 aaKnown RBP21.12■□□□□ 0.97
ACTN4-210ENST00000588618 TPT1P8Q9HAU6 139 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 SPAG4Q9NPE6 437 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 GMPR2Q9P2T1 348 aaKnown RBP21.12■□□□□ 0.97
ACTN4-210ENST00000588618 CORO2BQ9UQ03 480 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 MSRB2Q9Y3D2 182 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 CLIC1O00299 241 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 PLOD2O00469 737 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 UMODP07911 640 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 MAP4K2Q12851 820 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 SSPNQ14714 243 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 FAM111BQ6SJ93 734 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 GPR155Q7Z3F1 870 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 CPEB2Q7Z5Q1 589 aaKnown RBP21.12■□□□□ 0.97
ACTN4-210ENST00000588618 SLC15A3Q8IY34 581 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 OR7G2Q8NG99 324 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 ZFP90Q8TF47 636 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 TMEM125Q96AQ2 219 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 CLPTM1LQ96KA5 538 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 LPAR4Q99677 370 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 EFHD1Q9BUP0 239 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 EPS8L2Q9H6S3 715 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 CMTM6Q9NX76 183 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 ADA2Q9NZK5 511 aa21.12■□□□□ 0.97
ACTN4-210ENST00000588618 A0A087WV62 115 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 NME4O00746 187 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 GSC2O15499 205 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 PLOD3O60568 738 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 MMP11P24347 488 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 SLC7A2P52569 658 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 TRMT12Q53H54 448 aaKnown RBP21.11■□□□□ 0.97
ACTN4-210ENST00000588618 TMEM205Q6UW68 189 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 AMER2Q8N7J2 671 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 NUP43Q8NFH3 380 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 OR8J3Q8NGG0 315 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 PNPT1Q8TCS8 783 aaKnown RBP21.11■□□□□ 0.97
ACTN4-210ENST00000588618 VPS50Q96JG6 964 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 RAD21L1Q9H4I0 556 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 GPATCH2Q9NW75 528 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 COPS7AQ9UBW8 275 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 BCAP29Q9UHQ4 241 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 ERVK-19Q9WJR5 959 aa21.11■□□□□ 0.97
ACTN4-210ENST00000588618 HRKO00198 91 aa21.1■□□□□ 0.97
ACTN4-210ENST00000588618 COQ9O75208 318 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms