RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 FAM181AQ8N9Y4 354 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 ZBTB44Q8NCP5 570 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 OR2I1PQ8NGU4 316 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 PEX11GQ96HA9 241 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 SLC41A2Q96JW4 573 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 MS4A4EQ96PG1 132 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 ZNF607Q96SK3 696 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 RBCK1Q9BYM8 510 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 CLK4Q9HAZ1 481 aaKnown RBP18.62■□□□□ 0.57
TRIM47-204ENST00000587339 MAGED1Q9Y5V3 778 aaPredicted RBP18.62■□□□□ 0.57
TRIM47-204ENST00000587339 A0A0C4DFX4 3053 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 NCOR1O75376 2440 aa18.62■□□□□ 0.57
TRIM47-204ENST00000587339 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 LY6G6EA0A0G2JKS1 128 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 MYOCOSA0A1B0GUC4 107 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 PRAMEF27A3QJZ7 478 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 DLGAP1O14490 977 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 SP9P0CG40 484 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 DCTP40126 519 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 ALDH3A2P51648 485 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 CRISP3P54108 245 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 MAT1AQ00266 395 aaKnown RBP18.61■□□□□ 0.57
TRIM47-204ENST00000587339 GNA13Q14344 377 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 ZNF628Q5EBL2 1059 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 SLC23A3Q6PIS1 610 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 OR5K1Q8NHB7 308 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 ADAMTS18Q8TE60 1221 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 ANKRD9Q96BM1 317 aaPredicted RBP18.61■□□□□ 0.57
TRIM47-204ENST00000587339 GIMAP5Q96F15 307 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 CNBD2Q96M20 576 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 OR7D2Q96RA2 312 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 ACTRT3Q9BYD9 372 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 SMPD3Q9NY59 655 aaPredicted RBP18.61■□□□□ 0.57
TRIM47-204ENST00000587339 U3KQA8 63 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 EME2A4GXA9 379 aaPredicted RBP18.61■□□□□ 0.57
TRIM47-204ENST00000587339 H0YIG0 161 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 H3BMH7 237 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 ARHGAP33O14559 1287 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 ASNA1O43681 348 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 BMP10O95393 424 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 NELFEP18615 380 aaKnown RBP18.61■□□□□ 0.57
TRIM47-204ENST00000587339 TNFRSF1BP20333 461 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 NT5EP21589 574 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 OR1E2P47887 323 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 ITGA1P56199 1179 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 SLC13A2Q13183 592 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 DAG1Q14118 895 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 LPAL2Q16609 132 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 DUSP7Q16829 419 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 IQCCQ4KMZ1 466 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 TRMT12Q53H54 448 aaKnown RBP18.61■□□□□ 0.57
TRIM47-204ENST00000587339 TMEM71Q6P5X7 295 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 METTL27Q8N6F8 245 aaPredicted RBP18.61■□□□□ 0.57
TRIM47-204ENST00000587339 GATA6Q92908 595 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 RUBCNLQ9H714 662 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 CUTCQ9NTM9 273 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 GMEB2Q9UKD1 530 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 SH3GLB1Q9Y371 365 aa18.61■□□□□ 0.57
TRIM47-204ENST00000587339 BLACEA4D250 179 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 SLITRK5O94991 958 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 MFN2O95140 757 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 ALPLP05186 524 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 UBTFL6P0CB48 400 aaPredicted RBP18.6■□□□□ 0.57
TRIM47-204ENST00000587339 FOLR1P15328 257 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 MAN2A2P49641 1150 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 ARHGDIAP52565 204 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 SYT16Q17RD7 645 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 CYP27C1Q4G0S4 372 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 PERM1Q5SV97 790 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 MFSD12Q6NUT3 480 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 TMEM179BQ7Z7N9 219 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 KRT73Q86Y46 540 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 HIPK1Q86Z02 1210 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 GPR135Q8IZ08 494 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 HS3ST5Q8IZT8 346 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 GEMIN6Q8WXD5 167 aaKnown RBP18.6■□□□□ 0.57
TRIM47-204ENST00000587339 TFAP2CQ92754 450 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 ZNF768Q9H5H4 540 aaKnown RBP18.6■□□□□ 0.57
TRIM47-204ENST00000587339 ENAMQ9NRM1 1142 aa18.6■□□□□ 0.57
TRIM47-204ENST00000587339 ASXL3Q9C0F0 2248 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 DUXAA6NLW8 204 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 EIF4E1BA6NMX2 242 aaKnown RBP18.59■□□□□ 0.57
TRIM47-204ENST00000587339 CLDN4O14493 209 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 TOX3O15405 576 aaPredicted RBP18.59■□□□□ 0.57
TRIM47-204ENST00000587339 PCDHGA12O60330 932 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 SERPINB7O75635 380 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 CDC123O75794 336 aaPredicted RBP18.59■□□□□ 0.57
TRIM47-204ENST00000587339 SYPP08247 313 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 SLC35E2P0CK97 266 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 MERTKQ12866 999 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 SQSTM1Q13501 440 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 PRICKLE4Q2TBC4 344 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 SHQ1Q6PI26 577 aaKnown RBP18.59■□□□□ 0.57
TRIM47-204ENST00000587339 TTLL10Q6ZVT0 673 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 ZNF595Q8IYB9 648 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 ADAMTS15Q8TE58 950 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 RASSF5Q8WWW0 418 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 NAT6Q93015 286 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 COL21A1Q96P44 957 aa18.59■□□□□ 0.57
TRIM47-204ENST00000587339 ADI1Q9BV57 179 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms