RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 RMND5BQ96G75 393 aaPredicted RBP17.73■□□□□ 0.43
TRAF4-216ENST00000586813 GPR78Q96P69 363 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 SECISBP2Q96T21 854 aaKnown RBP17.73■□□□□ 0.43
TRAF4-216ENST00000586813 TIMP4Q99727 224 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 TMUB1Q9BVT8 246 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 UBQLN3Q9H347 655 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 LIME1Q9H400 295 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 CPSF2Q9P2I0 782 aaKnown RBP17.73■□□□□ 0.43
TRAF4-216ENST00000586813 TNPO3Q9Y5L0 923 aaKnown RBP17.73■□□□□ 0.43
TRAF4-216ENST00000586813 IKBKGQ9Y6K9 419 aa17.73■□□□□ 0.43
TRAF4-216ENST00000586813 TRAPPC6AO75865 159 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 KLHL2O95198 593 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 SNX4O95219 450 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 HPNP05981 417 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 CT62P0C5K7 136 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 CD99P14209 185 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 TIMP3P35625 211 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 MASP1P48740 699 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 CDK9P50750 372 aaKnown RBP17.72■□□□□ 0.43
TRAF4-216ENST00000586813 FUT7Q11130 342 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 KRTAP21-3Q3LHN1 58 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 FNDC7Q5VTL7 733 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 METTL2BQ6P1Q9 378 aaKnown RBP17.72■□□□□ 0.43
TRAF4-216ENST00000586813 PACS2Q86VP3 889 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 PM20D2Q8IYS1 436 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 ZNF615Q8N8J6 731 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 CHDHQ8NE62 594 aaPredicted RBP17.72■□□□□ 0.43
TRAF4-216ENST00000586813 ADIPOR1Q96A54 375 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 MRRFQ96E11 262 aaKnown RBP17.72■□□□□ 0.43
TRAF4-216ENST00000586813 CDK15Q96Q40 435 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 SERPINI1Q99574 410 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 ANGPTL4Q9BY76 406 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 PRDM14Q9GZV8 571 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 OR10A5Q9H207 317 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 ZNF629Q9UEG4 869 aaPredicted RBP17.72■□□□□ 0.43
TRAF4-216ENST00000586813 C15orf41Q9Y2V0 281 aa17.72■□□□□ 0.43
TRAF4-216ENST00000586813 MAP1AP78559 2803 aaPredicted RBP17.71■□□□□ 0.43
TRAF4-216ENST00000586813 A6NNC1 897 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 OR7A17O14581 309 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 CLDN9O95484 217 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 ARL1P40616 181 aaPredicted RBP17.71■□□□□ 0.43
TRAF4-216ENST00000586813 SERPINB8P50452 374 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 NRG3P56975 720 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 CEBPEQ15744 281 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 TECRLQ5HYJ1 363 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 VASNQ6EMK4 673 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 POMZP3Q6PJE2 187 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 TGIF2LYQ8IUE0 185 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 PRR22Q8IZ63 422 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 C17orf47Q8NEP4 570 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 OR52B6Q8NGF0 335 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 FAM222BQ8WU58 562 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 HSPBAP1Q96EW2 488 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 GNRHR2Q96P88 292 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 NOL11Q9H8H0 719 aaKnown RBP17.71■□□□□ 0.43
TRAF4-216ENST00000586813 MTRF1LQ9UGC7 380 aaKnown RBP17.71■□□□□ 0.43
TRAF4-216ENST00000586813 FOXD3Q9UJU5 478 aaPredicted RBP17.71■□□□□ 0.43
TRAF4-216ENST00000586813 CBLCQ9ULV8 474 aa17.71■□□□□ 0.43
TRAF4-216ENST00000586813 ACSL3O95573 720 aa17.7■□□□□ 0.42
TRAF4-216ENST00000586813 IL2RAP01589 272 aa17.7■□□□□ 0.42
TRAF4-216ENST00000586813 ALDOAP04075 364 aaKnown RBP17.7■□□□□ 0.42
TRAF4-216ENST00000586813 CASP3P42574 277 aa17.7■□□□□ 0.42
TRAF4-216ENST00000586813 ZNF136P52737 540 aa17.7■□□□□ 0.42
TRAF4-216ENST00000586813 RPP38P78345 283 aaKnown RBP17.7■□□□□ 0.42
TRAF4-216ENST00000586813 UAP1Q16222 522 aaPredicted RBP17.7■□□□□ 0.42
TRAF4-216ENST00000586813 NHSL2Q5HYW2 709 aa17.7■□□□□ 0.42
TRAF4-216ENST00000586813 C6orf163Q5TEZ5 329 aa17.7■□□□□ 0.42
TRAF4-216ENST00000586813 NSUN5P2Q63ZY6 315 aa17.7■□□□□ 0.42
TRAF4-216ENST00000586813 CDC20BQ86Y33 519 aa17.7■□□□□ 0.42
TRAF4-216ENST00000586813 PTGR2Q8N8N7 351 aaPredicted RBP17.7■□□□□ 0.42
TRAF4-216ENST00000586813 OR4K14Q8NGD5 310 aa17.7■□□□□ 0.42
TRAF4-216ENST00000586813 POM121Q96HA1 1249 aa17.7■□□□□ 0.42
TRAF4-216ENST00000586813 TMEM41AQ96HV5 264 aa17.7■□□□□ 0.42
TRAF4-216ENST00000586813 CAMK2AQ9UQM7 478 aa17.7■□□□□ 0.42
TRAF4-216ENST00000586813 PLEKHA6Q9Y2H5 1048 aa17.7■□□□□ 0.42
TRAF4-216ENST00000586813 SLC6A5Q9Y345 797 aa17.7■□□□□ 0.42
TRAF4-216ENST00000586813 MPDZO75970 2070 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 KLK1P06870 262 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 CPMP14384 443 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 NT5EP21589 574 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 GPX3P22352 226 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 TACR1P25103 407 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 ABCD3P28288 659 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 TYK2P29597 1187 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 XKP51811 444 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 TOMM20Q15388 145 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 SF3B4Q15427 424 aaKnown RBP eCLIP17.69■□□□□ 0.424e-8■■■□□ 19
TRAF4-216ENST00000586813 EIPR1Q53HC9 387 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 DCST1Q5T197 706 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 FRG2Q64ET8 278 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 OR7G1Q8NGA0 311 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 GOT1L1Q8NHS2 421 aaPredicted RBP17.69■□□□□ 0.42
TRAF4-216ENST00000586813 NTNG2Q96CW9 530 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 FRG2BQ96QU4 278 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 UGT2B28Q9BY64 529 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 MRPL1Q9BYD6 325 aaKnown RBP17.69■□□□□ 0.42
TRAF4-216ENST00000586813 ADAM29Q9UKF5 820 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 DTX4Q9Y2E6 619 aa17.69■□□□□ 0.42
TRAF4-216ENST00000586813 VPS13CQ709C8 3753 aa17.68■□□□□ 0.42
TRAF4-216ENST00000586813 CD8B2A6NJW9 211 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms