RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 GALNSP34059 522 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 OPRM1P35372 400 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 PIK3CBP42338 1070 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 SLC12A2P55011 1212 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 RPS13P62277 151 aaKnown RBP10.83□□□□□ -0.68
BRCA1-225ENST00000586385 DR1Q01658 176 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 BIKQ13323 160 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 FBXW10Q5XX13 1052 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 TIGD3Q6B0B8 471 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 YRDCQ86U90 279 aaKnown RBP10.83□□□□□ -0.68
BRCA1-225ENST00000586385 ZBED8Q8IZ13 594 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 C7orf57Q8NEG2 295 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 FAM83FQ8NEG4 500 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-225ENST00000586385 ABTB1Q969K4 478 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-225ENST00000586385 UBE2E3Q969T4 207 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 TMEM41AQ96HV5 264 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 SECISBP2Q96T21 854 aaKnown RBP10.83□□□□□ -0.68
BRCA1-225ENST00000586385 RBBP8Q99708 897 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 PELOQ9BRX2 385 aaKnown RBP10.83□□□□□ -0.68
BRCA1-225ENST00000586385 YIPF4Q9BSR8 244 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 TRIM31Q9BZY9 425 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 DDX31Q9H8H2 851 aaKnown RBP10.83□□□□□ -0.68
BRCA1-225ENST00000586385 NSMCE4AQ9NXX6 385 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 NUDT4Q9NZJ9 180 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 FETUBQ9UGM5 382 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 RNF112Q9ULX5 631 aa10.83□□□□□ -0.68
BRCA1-225ENST00000586385 C2orf72A6NCS6 295 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 FAM159BA6NKW6 160 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 TP53I11O14683 189 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 GNB5O14775 395 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 GBAP04062 536 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 ABCB1P08183 1280 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-225ENST00000586385 FAM58BPP0C7Q3 252 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 TMIGD3P0DMS9 266 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-225ENST00000586385 NR2F6P10588 404 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 STMN1P16949 149 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 TLX1P31314 330 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-225ENST00000586385 RAP1GDS1P52306 607 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 RAB10P61026 200 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 SHEQ5VZ18 495 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 CMC1Q7Z7K0 106 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 CREG2Q8IUH2 290 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 TAGAPQ8N103 731 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 SIMC1Q8NDZ2 872 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 ZPLD1Q8TCW7 415 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 HGDQ93099 445 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 TSPAN17Q96FV3 270 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 DACH2Q96NX9 599 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 NODALQ96S42 347 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 RBM24Q9BX46 236 aaKnown RBP10.82□□□□□ -0.68
BRCA1-225ENST00000586385 NXF5Q9H1B4 397 aaKnown RBP10.82□□□□□ -0.68
BRCA1-225ENST00000586385 SNX15Q9NRS6 342 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 RYDENQ9NUL5 291 aaKnown RBP10.82□□□□□ -0.68
BRCA1-225ENST00000586385 OPTCQ9UBM4 332 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 CSPG4Q6UVK1 2322 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 DOCK7Q96N67 2140 aa10.82□□□□□ -0.68
BRCA1-225ENST00000586385 TCRBV9S1A1TA0A576 114 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 SH3D21A4FU49 640 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 DEFB108AA8MXU0 73 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 B4DXG7 233 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 SNPHO15079 494 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 KERAO60938 352 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 CPN1P15169 458 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 GPX3P22352 226 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 ABCD3P28288 659 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 GP5P40197 560 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 BUD31P41223 144 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-225ENST00000586385 MASP1P48740 699 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 NEK2P51955 445 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 ARFIP1P53367 373 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 GPX6P59796 221 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 MRPS25P82663 173 aaKnown RBP10.81□□□□□ -0.68
BRCA1-225ENST00000586385 MGAT2Q10469 447 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 NNATQ16517 81 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 Q5PR19 223 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 ANGPTL8Q6UXH0 198 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 LUZP2Q86TE4 346 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 PACS2Q86VP3 889 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 GALNT12Q8IXK2 581 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 GCNT2Q8N0V5 402 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 TEX9Q8N6V9 391 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 WDSUB1Q8N9V3 476 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 STAG3L4Q8TBR4 150 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 WDR20Q8TBZ3 569 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 SMPDL3BQ92485 455 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 ZNF592Q92610 1267 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 CTHRC1Q96CG8 243 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 UCN2Q96RP3 112 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 CPNE1Q99829 537 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 OR10A5Q9H207 317 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 ZNF395Q9H8N7 513 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-225ENST00000586385 GALNT9Q9HCQ5 603 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 LYARQ9NX58 379 aaKnown RBP10.81□□□□□ -0.68
BRCA1-225ENST00000586385 CLCF1Q9UBD9 225 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 ADGRE2Q9UHX3 823 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 SNX24Q9Y343 169 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 TESMINQ9Y4I5 508 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 WIF1Q9Y5W5 379 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 TLN2Q9Y4G6 2542 aa10.81□□□□□ -0.68
BRCA1-225ENST00000586385 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms