RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 TMEM9Q9P0T7 183 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 SEMA5BQ9P283 1151 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 COPS7AQ9UBW8 275 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 C19orf25Q9UFG5 118 aaPredicted RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 EXO1Q9UQ84 846 aaKnown RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 LIPT1Q9Y234 373 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 CFL2Q9Y281 166 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 BTBD3Q9Y2F9 522 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 ORC6Q9Y5N6 252 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 GMEB1Q9Y692 573 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 FER1L5A0AVI2 2057 aa5.82□□□□□ -1.48
LIG3-206ENST00000586058 SPTBN5Q9NRC6 3674 aaKnown RBP5.82□□□□□ -1.48
LIG3-206ENST00000586058 NINQ8N4C6 2090 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 ARID1BQ8NFD5 2236 aaPredicted RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 A0A087WV62 115 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 A0A1W2PQM1 296 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 TTC36A6NLP5 189 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 POLR1CO15160 346 aaPredicted RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 PGRMC2O15173 223 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 FGF17O60258 216 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 TPST1O60507 370 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 B4GALT2O60909 372 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 CTNSO60931 367 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 E2F6O75461 281 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 CDC123O75794 336 aaPredicted RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 CST1P01037 141 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 LDLRP01130 860 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 AVPP01185 164 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 HMGN2P05204 90 aaKnown RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 FABP3P05413 133 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 ALOX5P09917 674 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 JMJD7P0C870 316 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 SLC35E2P0CK97 266 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 ARAFP10398 606 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 ETFAP13804 333 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 FOLR1P15328 257 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 ZNF23P17027 643 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 HOXB9P17482 250 aaPredicted RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 ATP6V1C1P21283 382 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 PTPN6P29350 595 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 KRT20P35900 424 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 GABRA4P48169 554 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 PTDSS1P48651 473 aaKnown RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 CLCN2P51788 898 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 MS4A2Q01362 244 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 SPEM2Q0P670 501 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 EIF3IQ13347 325 aaKnown RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 LASP1Q14847 261 aaKnown RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 CSRP2Q16527 193 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 FXNQ16595 210 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 TMEM164Q5U3C3 297 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 HLA-DQA1Q5Y7H0 255 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 RHBDD2Q6NTF9 364 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 FAM180BQ6P0A1 224 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 QSOX2Q6ZRP7 698 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 PRSS41Q7RTY9 318 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 ERMP1Q7Z2K6 904 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 DGLUCYQ7Z3D6 616 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 CALHM3Q86XJ0 350 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 PDSS2Q86YH6 399 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 ZZZ3Q8IYH5 903 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 MMP21Q8N119 569 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 LGI4Q8N135 537 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 COX18Q8N8Q8 333 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 AMER3Q8N944 861 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 CDRT4Q8N9R6 151 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 RCBTB1Q8NDN9 531 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 OR5T3Q8NGG3 340 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 NFKBIDQ8NI38 313 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 SUN3Q8TAQ9 357 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 ZNF675Q8TD23 568 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 NUDT8Q8WV74 236 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 CANT1Q8WVQ1 401 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 METTL21AQ8WXB1 218 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 SLC9A6Q92581 669 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 RIT1Q92963 219 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 ELP4Q96EB1 424 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 DUS3LQ96G46 650 aaKnown RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 DEPDC7Q96QD5 511 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 ZPBPQ9BS86 351 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 C9orf16Q9BUW7 83 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 CNPPD1Q9BV87 410 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 BTBD2Q9BX70 525 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 KLHL4Q9C0H6 718 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 SPRTNQ9H040 489 aaPredicted RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 IKZF5Q9H5V7 419 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 RUBCNLQ9H714 662 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 Q9N2J8 555 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 A4GALTQ9NPC4 353 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 ADAP2Q9NPF8 381 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 SLC6A13Q9NSD5 602 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 SEMA4GQ9NTN9 838 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 CCM2LQ9NUG4 571 aaPredicted RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 KLHL28Q9NXS3 571 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 KCMF1Q9P0J7 381 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 KIF17Q9P2E2 1029 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 DHCR7Q9UBM7 475 aaKnown RBP5.81□□□□□ -1.48
LIG3-206ENST00000586058 SEC14L3Q9UDX4 400 aa5.81□□□□□ -1.48
LIG3-206ENST00000586058 PRODH2Q9UF12 536 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms