RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 JUNP05412 331 aaKnown RBP12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 LINC00032P0C843 101 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 NAGAP17050 411 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 NME2P22392 152 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 HPCAL1P37235 193 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 MLLT10P55197 1068 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 TBCELQ5QJ74 424 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 RTL4Q6ZR62 310 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 C9orf40Q8IXQ3 194 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 ZNF615Q8N8J6 731 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 ST6GALNAC3Q8NDV1 305 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 CATSPER1Q8NEC5 780 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 NR4A3Q92570 626 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 PPWD1Q96BP3 646 aaKnown RBP12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 BBS4Q96RK4 519 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 SECISBP2Q96T21 854 aaKnown RBP12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 BRINP2Q9C0B6 783 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 WWTR1Q9GZV5 400 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 REEP4Q9H6H4 257 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 MANSC1Q9H8J5 431 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 OLAHQ9NV23 265 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 ATAD3AQ9NVI7 634 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 NOP53Q9NZM5 478 aaKnown RBP12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 ERVK-11Q9UQG0 969 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 EIF3LQ9Y262 564 aaKnown RBP12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 BAHCC1Q9P281 2608 aa12.8□□□□□ -0.36
PRKCSH-202ENST00000585540 TMEM200CA6NKL6 621 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 TRPC5OSA6NMA1 111 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 MYO1GB0I1T2 1018 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 TCP11X1B4DZS4 312 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 PLOD2O00469 737 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 DYNC1I1O14576 645 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 PRKNO60260 465 aaPredicted RBP12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 PLOD3O60568 738 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 OR2J2O76002 312 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 SDC1P18827 310 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 FEN1P39748 380 aaKnown RBP12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 C21orf58P58505 322 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 KCNC4Q03721 635 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 PDE7AQ13946 482 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 ELOAQ14241 798 aaKnown RBP12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 PDCD2Q16342 344 aaPredicted RBP12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.79□□□□□ -0.369e-7■□□□□ 10.3
PRKCSH-202ENST00000585540 RFTN2Q52LD8 501 aaPredicted RBP12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 HSP90B2PQ58FF3 399 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 ZNF628Q5EBL2 1059 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 RGS9BPQ6ZS82 235 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 TICAM1Q8IUC6 712 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 CISD2Q8N5K1 135 aaKnown RBP12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 ZNF441Q8N8Z8 693 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 FNDC5Q8NAU1 212 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 GRHL3Q8TE85 626 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 EXOSC8Q96B26 276 aaKnown RBP12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 TUBGCP3Q96CW5 907 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 DTNBP1Q96EV8 351 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 HSPBAP1Q96EW2 488 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 ZBED6CLQ96FA7 236 aaPredicted RBP12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 SIGLEC12Q96PQ1 595 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 PRPF18Q99633 342 aaKnown RBP12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 SLX1AQ9BQ83 275 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 ACSS1Q9NUB1 689 aaPredicted RBP12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 INTS9Q9NV88 658 aaKnown RBP12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 ASF1BQ9NVP2 202 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 PNPOQ9NVS9 261 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 TAS2R9Q9NYW1 312 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 GIMAP2Q9UG22 337 aa12.79□□□□□ -0.36
PRKCSH-202ENST00000585540 KALRNO60229 2985 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 WASHC1A8K0Z3 465 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 MAN1A2O60476 641 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 FRKP42685 505 aaPredicted RBP12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 OCRLQ01968 901 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 EMX2Q04743 252 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 MLC1Q15049 377 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 DPY19L1Q2PZI1 675 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 GALNTL6Q49A17 601 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 KRTCAP3Q53RY4 240 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 C6orf136Q5SQH8 315 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 ZNF324BQ6AW86 544 aaPredicted RBP12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 SPINK14Q6IE38 97 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 TMEM81Q6P7N7 255 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 DGAT2L6Q6ZPD8 337 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 GK5Q6ZS86 529 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 GALNTL5Q7Z4T8 443 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 AMER2Q8N7J2 671 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 ZNF321PQ8N8H1 164 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 PSD4Q8NDX1 1056 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 CDC26Q8NHZ8 85 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 THAP3Q8WTV1 239 aaPredicted RBP12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 DYDC1Q8WWB3 177 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 ZNF75CPQ92670 426 aaPredicted RBP12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 UCN3Q969E3 161 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 PPCDCQ96CD2 204 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 SPACA9Q96E40 222 aaPredicted RBP12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 PPP1R36Q96LQ0 422 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 C3orf30Q96M34 536 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 GAL3ST4Q96RP7 486 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 CLMPQ9H6B4 373 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 MED4Q9NPJ6 270 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 SACM1LQ9NTJ5 587 aa12.78□□□□□ -0.36
PRKCSH-202ENST00000585540 CNIH4Q9P003 139 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms