RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 TMIEQ8NEW7 156 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 OR4K5Q8NGD3 323 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 WFIKKN2Q8TEU8 576 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 CREB3L4Q8TEY5 395 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 MSLNLQ96KJ4 702 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 LRR1Q96L50 414 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 NELL2Q99435 816 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 FNDC11Q9BVV2 318 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 MCOLN1Q9GZU1 580 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 OR51I1Q9H343 314 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TMEM39AQ9NV64 488 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TAS2R7Q9NYW3 318 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 KLHL20Q9Y2M5 609 aa13.42□□□□□ -0.26
CDK5RAP3-237ENST00000585163 A0A1W2PQ09 198 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 HIDE1A8MVS5 230 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 SLC9A3R1O14745 358 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 MSL3P1P0C860 447 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ADRB3P13945 408 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 AZGP1P25311 298 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ETV5P41161 510 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ETV1P50549 477 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 CDK5Q00535 292 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 REEP5Q00765 189 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 MXD1Q05195 221 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 FLYWCH1Q4VC44 716 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ACSM5Q6NUN0 579 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PRR23CQ6ZRP0 262 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 AMZ2Q86W34 360 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 C12orf40Q86WS4 652 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 OR5D16Q8NGK9 328 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 OR5K2Q8NHB8 316 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 XAGE5Q8WWM1 108 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 RGMAQ96B86 450 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ZNF582Q96NG8 517 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 H7BY64 318 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 IDH3BO43837 385 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 NR2F1P10589 423 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ACADMP11310 421 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ERVFC1P60507 584 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 SCN1BQ07699 218 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 C9orf64Q5T6V5 341 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 C1orf94Q6P1W5 598 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 UBE3DQ7Z6J8 389 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 MORN4Q8NDC4 146 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 UCN3Q969E3 161 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ST6GAL2Q96JF0 529 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 SLC35G5Q96KT7 338 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PRAP1Q96NZ9 151 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 SNX18Q96RF0 628 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 GPA33Q99795 319 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 MENTQ9BUN1 341 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ABCB9Q9NP78 766 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TIGARQ9NQ88 270 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ZSCAN32Q9NX65 697 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PLEKHB1Q9UF11 243 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ADAM29Q9UKF5 820 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 SLC9A8Q9Y2E8 581 aa13.41□□□□□ -0.26
CDK5RAP3-237ENST00000585163 NDUFS4O43181 175 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 EPHX1P07099 455 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PSMB5P28074 263 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PPP2R1BP30154 601 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 HSD17B2P37059 387 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 DDOSTP39656 456 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 GAS1P54826 345 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 NTHL1P78549 312 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 LSM11P83369 360 aaKnown RBP eCLIP13.4□□□□□ -0.263e-9■■□□□ 12.5
CDK5RAP3-237ENST00000585163 MESP2Q0VG99 397 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 C3orf38Q5JPI3 329 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ENTPD8Q5MY95 495 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ATAT1Q5SQI0 421 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ERN2Q76MJ5 926 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 IQCHQ86VS3 1027 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PITHD1Q9GZP4 211 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PCBD2Q9H0N5 130 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 MIXL1Q9H2W2 232 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 GLIPR2Q9H4G4 154 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 NT5DC2Q9H857 520 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 DDX31Q9H8H2 851 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 MRPS18AQ9NVS2 196 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 SLC23A2Q9UGH3 650 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 IRAK3Q9Y616 596 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TCF20Q9UGU0 1960 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 STK25O00506 426 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 EPPINO95925 133 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ADH5P11766 374 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 WNT4P56705 351 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 HYAL2Q12891 473 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 HNRNPA0Q13151 305 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ASAH1Q13510 395 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 KLHL22Q53GT1 634 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 TCEAL5Q5H9L2 206 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 C22orf42Q6IC83 251 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 XKRXQ6PP77 449 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 FAM131AQ6UXB0 335 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 SZRD1Q7Z422 152 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 AMER3Q8N944 861 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 PLA2G15Q8NCC3 412 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 ANKK1Q8NFD2 765 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 OR6T1Q8NGN1 323 aa13.4□□□□□ -0.26
CDK5RAP3-237ENST00000585163 OR8D1Q8WZ84 308 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms