RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 TAMM41Q96BW9 452 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 OR2A14Q96R47 310 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 DPH2Q9BQC3 489 aaPredicted RBP14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 DMRT3Q9NQL9 472 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 FSCN3Q9NQT6 498 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 RNF6Q9Y252 685 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 GOLGA4Q13439 2230 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 CCDC88CQ9P219 2028 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 SH3D21A4FU49 640 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 FAM221BA6H8Z2 402 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 ANKDD1BA6NHY2 528 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 TMEM229AB2RXF0 380 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 OR1F1O43749 312 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 GCM2O75603 506 aaPredicted RBP14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 DIRAS1O95057 198 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 TGFB1P01137 390 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 UGT2B7P16662 529 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 FASLGP48023 281 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 ARRB1P49407 418 aaPredicted RBP14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 VBP1P61758 197 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 LAPTM4AQ15012 233 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 SHBQ15464 509 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 AGAP7PQ5VUJ5 663 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 USP43Q70EL4 1123 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 AHSA2Q719I0 299 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 VN1R5Q7Z5H4 357 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 TRIM73Q86UV7 250 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 ARMC8Q8IUR7 673 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 SLC25A45Q8N413 288 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 DNAJC22Q8N4W6 341 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 AMER2Q8N7J2 671 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 ZBTB44Q8NCP5 570 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 FLVCR1-AS1Q8TAF5 88 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 GEMIN6Q8WXD5 167 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 COL21A1Q96P44 957 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 FEVQ99581 238 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 TWSG1Q9GZX9 223 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 SP140LQ9H930 580 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 ZNF556Q9HAH1 456 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 C1GALT1Q9NS00 363 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 TMEM184CQ9NVA4 438 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 HRASLS2Q9NWW9 162 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 ACTR10Q9NZ32 417 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 SH3BP4Q9P0V3 963 aa14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 MDC1Q14676 2089 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-236ENST00000584991 LCMT2O60294 686 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 CFIP05156 583 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 FURINP09958 794 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 TGM1P22735 817 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 NR4A1P22736 598 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 EPHA2P29317 976 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 ALDH9A1P49189 494 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 PRIM2P49643 509 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 PSMD7P51665 324 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 RPS3AP61247 264 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 CYP4F2P78329 520 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 CDC20Q12834 499 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 CBX3Q13185 183 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 PEAR1Q5VY43 1037 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 OGFOD3Q6PK18 319 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 ZNF605Q86T29 641 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 C17orf82Q86X59 251 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 AVL9Q8NBF6 648 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 OR10G2Q8NGC3 310 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 SPPL2AQ8TCT8 520 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 MAPKAP1Q9BPZ7 522 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 PITHD1Q9GZP4 211 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 NXF2Q9GZY0 626 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 RHBGQ9H310 441 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 OR51B5Q9H339 312 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 NT5DC2Q9H857 520 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 RASSF1Q9NS23 344 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 TAS2R9Q9NYW1 312 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 PCDHGA2Q9Y5H1 932 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 KLK4Q9Y5K2 254 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 PMF1-BGLAPU3KQ54 211 aa14.15□□□□□ -0.14
CDK5RAP3-236ENST00000584991 CABIN1Q9Y6J0 2220 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 C2orf74A8MZ97 194 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 HAT1O14929 419 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 AIREO43918 545 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 NUDT7P0C024 238 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 BMP4P12644 408 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 TYRP1P17643 537 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 CRATP43155 626 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 MAGEA8P43361 318 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 CLK1P49759 484 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 ZNF45Q02386 682 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 SCARB2Q14108 478 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 DGCR6Q14129 220 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 LPAL2Q16609 132 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 SMN1Q16637 294 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 ZNF404Q494X3 552 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 C14orf28Q4W4Y0 310 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 PLEKHG7Q6ZR37 379 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 TSEN54Q7Z6J9 526 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 GPR156Q8NFN8 814 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 KBTBD8Q8NFY9 601 aa14.14□□□□□ -0.15
CDK5RAP3-236ENST00000584991 CDC26Q8NHZ8 85 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms