RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 CCT3P49368 545 aaKnown RBP17.08■□□□□ 0.32
RFFL-211ENST00000584541 MRPS35P82673 323 aaKnown RBP17.08■□□□□ 0.32
RFFL-211ENST00000584541 ART3Q13508 389 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 PCOLCEQ15113 449 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 EXT1Q16394 746 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 BROXQ5VW32 411 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 BHLHB9Q6PI77 547 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 UNQ6494/PRO21346Q6UXR6 183 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 DNAJC14Q6Y2X3 702 aaPredicted RBP17.08■□□□□ 0.32
RFFL-211ENST00000584541 TMEM64Q6YI46 380 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 LRRC69Q6ZNQ3 347 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 SZRD1Q7Z422 152 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 DHDDSQ86SQ9 333 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 B3GNT7Q8NFL0 401 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 OR7G1Q8NGA0 311 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 SLC2A12Q8TD20 617 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 SFXN5Q8TD22 340 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 ADAMTS17Q8TE56 1095 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 CTHRC1Q96CG8 243 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 SENP5Q96HI0 755 aaPredicted RBP17.08■□□□□ 0.32
RFFL-211ENST00000584541 MAGED4Q96JG8 741 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 TMEM121BQ9BXQ6 578 aaPredicted RBP17.08■□□□□ 0.32
RFFL-211ENST00000584541 OR8D2Q9GZM6 311 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 CXorf36Q9H7Y0 433 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 SIRT3Q9NTG7 399 aaPredicted RBP17.08■□□□□ 0.32
RFFL-211ENST00000584541 P4HTMQ9NXG6 502 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 BCAP29Q9UHQ4 241 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 NCOR2Q9Y618 2525 aa17.08■□□□□ 0.32
RFFL-211ENST00000584541 COQ9O75208 318 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 HPP00738 406 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 NPPAP01160 153 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 GSNP06396 782 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 ZCCHC18P0CG32 403 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 ICAM2P13598 275 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 CALB2P22676 271 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 CHI3L1P36222 383 aaPredicted RBP17.07■□□□□ 0.32
RFFL-211ENST00000584541 CDKN2CP42773 168 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 SLC26A5P58743 744 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 MXRA7P84157 204 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 MGAT2Q10469 447 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 SRSF6Q13247 344 aaKnown RBP17.07■□□□□ 0.32
RFFL-211ENST00000584541 CRTC2Q53ET0 693 aaPredicted RBP17.07■□□□□ 0.32
RFFL-211ENST00000584541 TRMT12Q53H54 448 aaKnown RBP17.07■□□□□ 0.32
RFFL-211ENST00000584541 LRIF1Q5T3J3 769 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 RETREG3Q86VR2 466 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 OR7G2Q8NG99 324 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 OR56A1Q8NGH5 318 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 OR1N1Q8NGS0 311 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 DOK4Q8TEW6 326 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 THAP4Q8WY91 577 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 ROPN1LQ96C74 230 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 DCBLD2Q96PD2 775 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 WDR77Q9BQA1 342 aaPredicted RBP17.07■□□□□ 0.32
RFFL-211ENST00000584541 MESP1Q9BRJ9 268 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 SLC35A5Q9BS91 424 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 PAIP1Q9H074 479 aaKnown RBP17.07■□□□□ 0.32
RFFL-211ENST00000584541 ZCCHC3Q9NUD5 404 aaKnown RBP17.07■□□□□ 0.32
RFFL-211ENST00000584541 ZNF639Q9UID6 485 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 FBXL4Q9UKA2 621 aa17.07■□□□□ 0.32
RFFL-211ENST00000584541 RNF103-CHMP3A0A140T963 221 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 PRAMEF2O60811 474 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 UBOX5O94941 541 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 CBX6O95503 412 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 DDAH2O95865 285 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 CPA2P48052 419 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 NUDT2P50583 147 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 PRKAG1P54619 331 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 AP2B1P63010 937 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 FUT7Q11130 342 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 ATP1A4Q13733 1029 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 BTBD16Q32M84 506 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 TRMT5Q32P41 509 aaKnown RBP17.06■□□□□ 0.32
RFFL-211ENST00000584541 RNF111Q6ZNA4 994 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 OR2L13Q8N349 312 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 NFAM1Q8NET5 270 aaPredicted RBP17.06■□□□□ 0.32
RFFL-211ENST00000584541 NUP43Q8NFH3 380 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 OR5AK3PQ8NH89 298 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 FAM120BQ96EK7 910 aaKnown RBP17.06■□□□□ 0.32
RFFL-211ENST00000584541 VMP1Q96GC9 406 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 FER1L6-AS2Q96M78 137 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 PHF12Q96QT6 1004 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 OR10A5Q9H207 317 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 IL1RL2Q9HB29 575 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 ZNF160Q9HCG1 818 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 MAP10Q9P2G4 905 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.06■□□□□ 0.32
RFFL-211ENST00000584541 PPIEQ9UNP9 301 aaKnown RBP17.06■□□□□ 0.32
RFFL-211ENST00000584541 C19orf53Q9UNZ5 99 aaPredicted RBP17.06■□□□□ 0.32
RFFL-211ENST00000584541 CFL2Q9Y281 166 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 PCDHB14Q9Y5E9 798 aa17.06■□□□□ 0.32
RFFL-211ENST00000584541 C1QTNF9BB2RNN3 333 aa17.05■□□□□ 0.32
RFFL-211ENST00000584541 UPK1AO00322 258 aa17.05■□□□□ 0.32
RFFL-211ENST00000584541 KRT75O95678 551 aa17.05■□□□□ 0.32
RFFL-211ENST00000584541 C1QTNF9P0C862 333 aa17.05■□□□□ 0.32
RFFL-211ENST00000584541 PRKAR1AP10644 381 aa17.05■□□□□ 0.32
RFFL-211ENST00000584541 PPIBP23284 216 aaKnown RBP17.05■□□□□ 0.32
RFFL-211ENST00000584541 SSTR4P31391 388 aa17.05■□□□□ 0.32
RFFL-211ENST00000584541 CLCN2P51788 898 aa17.05■□□□□ 0.32
RFFL-211ENST00000584541 TP53BP2Q13625 1128 aa17.05■□□□□ 0.32
RFFL-211ENST00000584541 EXOSC7Q15024 291 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms