RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 PSRC1Q6PGN9 363 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NPSR1Q6W5P4 371 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 PGAP1Q75T13 922 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SLC39A11Q8N1S5 342 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 OR9A2Q8NGT5 310 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 STK35Q8TDR2 534 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NPY6RQ99463 290 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 TGIF2Q9GZN2 237 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 IL22Q9GZX6 179 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SEMA3GQ9NS98 782 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SLCO1C1Q9NYB5 712 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 UBP1Q9NZI7 540 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 CLCA2Q9UQC9 943 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 COL4A6Q14031 1691 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 BBIP1A8MTZ0 92 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 GJB5O95377 273 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SLC34A2O95436 690 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ENGP17813 658 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NMBRP28336 390 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 HTRA4P83105 476 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 EFEMP1Q12805 493 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 CAMK2DQ13557 499 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NAA40Q86UY6 237 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 FSTL5Q8N475 847 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 UCN3Q969E3 161 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ZBED6CLQ96FA7 236 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ZNF559Q9BR84 538 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 MENTQ9BUN1 341 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 EDEM2Q9BV94 578 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 RNF32Q9H0A6 362 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 TKTL2Q9H0I9 626 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 REEP4Q9H6H4 257 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 PLCXD1Q9NUJ7 323 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 POMT2Q9UKY4 750 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 MMACHCQ9Y4U1 282 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ORC6Q9Y5N6 252 aa11.3□□□□□ -0.6
CDK5RAP3-232ENST00000584168 URADA6NGE7 173 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 FXYD1O00168 92 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 LYRM1O43325 122 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 LZTS3O60299 673 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 RAD1O60671 282 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SLC22A3O75751 556 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 GLUD1P00367 558 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 FGF4P08620 206 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 HIST1H2AGP0C0S8 130 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ERCC2P18074 760 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 HIST1H2ADP20671 130 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 EFNA1P20827 205 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 C4BPBP20851 252 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NOS2P35228 1153 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 GCGRP47871 477 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 MAN2A2P49641 1150 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NUTF2P61970 127 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 HABP2Q14520 560 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NR6A1Q15406 480 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SLC14A2Q15849 920 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 CCDC157Q569K6 752 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 TRIQKQ629K1 86 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 HIST2H2AA3Q6FI13 130 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SPESP1Q6UW49 350 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 MSANTD1Q6ZTZ1 278 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 LDLRAD3Q86YD5 345 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SPATA6LQ8N4H0 392 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 DNAJC22Q8N4W6 341 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ZNF383Q8NA42 475 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 POMGNT2Q8NAT1 580 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 WFIKKN2Q8TEU8 576 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 CREB3L1Q96BA8 519 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SCRN2Q96FV2 425 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 HIST1H2AHQ96KK5 128 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 C3orf30Q96M34 536 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 HIST1H2AJQ99878 128 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 DUSP15Q9H1R2 295 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 UNKLQ9H9P5 680 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 DHCR7Q9UBM7 475 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NDRG4Q9ULP0 352 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 MRPS23Q9Y3D9 190 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ANKRD12Q6UB98 2062 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 TRANK1O15050 2925 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 DOCK6Q96HP0 2047 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 PRRC2BQ5JSZ5 2229 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NUP205Q92621 2012 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 LOC102723532A0A0G2JNH3 316 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 HIDE1A8MVS5 230 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NRG2O14511 850 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 ARSAP15289 507 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 KIR3DL2P43630 455 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 STARD6P59095 220 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 BTG1P62324 171 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 TBCEQ15813 527 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 AFTPHQ6ULP2 937 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 DENND6AQ8IWF6 608 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 UXS1Q8NBZ7 420 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 SPPL2BQ8TCT7 592 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 RXFP4Q8TDU9 374 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 FBXO32Q969P5 355 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 NT5C3BQ969T7 300 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 LRFN5Q96NI6 719 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 CYP2S1Q96SQ9 504 aa11.29□□□□□ -0.6
CDK5RAP3-232ENST00000584168 OMDQ99983 421 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms