RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 TIA1P31483 386 aaKnown RBP eCLIP9.13□□□□□ -0.955e-7■■□□□ 11.7
SKA2-208ENST00000583927 SOX18P35713 384 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 TMED10P49755 219 aaKnown RBP9.13□□□□□ -0.95
SKA2-208ENST00000583927 HTR6P50406 440 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 MGAT2Q10469 447 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 FOXO1Q12778 655 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 CFAP157Q5JU67 520 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 TBCELQ5QJ74 424 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 C6orf163Q5TEZ5 329 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 ARHGAP11AQ6P4F7 1023 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 TMEM81Q6P7N7 255 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 XKRXQ6PP77 449 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 PAOXQ6QHF9 649 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 SLC22A16Q86VW1 577 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 VWA5B2Q8N398 1253 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 FBXW8Q8N3Y1 598 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 ZNF808Q8N4W9 903 aaPredicted RBP9.13□□□□□ -0.95
SKA2-208ENST00000583927 CCNYL1Q8N7R7 359 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.13□□□□□ -0.952e-19■■■■■ 59.5
SKA2-208ENST00000583927 ZNF675Q8TD23 568 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 PHF10Q8WUB8 498 aaKnown RBP9.13□□□□□ -0.95
SKA2-208ENST00000583927 NTNG2Q96CW9 530 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 CNRIP1Q96F85 164 aaPredicted RBP9.13□□□□□ -0.95
SKA2-208ENST00000583927 CCDC120Q96HB5 630 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 APOPT1Q96IL0 206 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 HBEGFQ99075 208 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 IL1RL2Q9HB29 575 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 QPCTLQ9NXS2 382 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 TAS2R7Q9NYW3 318 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 MAT2BQ9NZL9 334 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 SENP1Q9P0U3 644 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 TIMM22Q9Y584 194 aa9.13□□□□□ -0.95
SKA2-208ENST00000583927 KLF2Q9Y5W3 355 aaPredicted RBP9.13□□□□□ -0.95
SKA2-208ENST00000583927 CHCHD2Q9Y6H1 151 aaPredicted RBP9.13□□□□□ -0.95
SKA2-208ENST00000583927 TRGV8A0A0C4DH27 118 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 A0A1B0GVC2 190 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 A0A1W2PS29 197 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 OR14I1A6ND48 311 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 E9PLN8 166 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 CCL21O00585 134 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 PRRG2O14669 202 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 HS6ST1O60243 411 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 SUSD5O60279 629 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 NPHS1O60500 1241 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 BCAS2O75934 225 aaPredicted RBP9.12□□□□□ -0.95
SKA2-208ENST00000583927 RSL1D1O76021 490 aaKnown RBP9.12□□□□□ -0.95
SKA2-208ENST00000583927 SLITRK5O94991 958 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 IFI6P09912 130 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 CCL3P10147 92 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 CHN1P15882 459 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 NAGAP17050 411 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 SSTR4P31391 388 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 SERPINB5P36952 375 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 FOXA1P55317 472 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 NRG3P56975 720 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 GPR85P60893 370 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 DCAF7P61962 342 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 PSPHP78330 225 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 ZNF763Q0D2J5 394 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 PCLAFQ15004 111 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 C3AR1Q16581 482 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 ZNF750Q32MQ0 723 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 FGD2Q7Z6J4 655 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 C4orf33Q8N1A6 199 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 LRRC25Q8N386 305 aaPredicted RBP9.12□□□□□ -0.95
SKA2-208ENST00000583927 C16orf78Q8WTQ4 265 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 ITLN2Q8WWU7 325 aaPredicted RBP9.12□□□□□ -0.95
SKA2-208ENST00000583927 KLHL29Q96CT2 875 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 HSPBAP1Q96EW2 488 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 APIPQ96GX9 242 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 ZNF764Q96H86 408 aaPredicted RBP9.12□□□□□ -0.95
SKA2-208ENST00000583927 DOCK7Q96N67 2140 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 KCNA7Q96RP8 456 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 VKORC1Q9BQB6 163 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 TTTY12Q9BZ98 90 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 TSPAN10Q9H1Z9 355 aaPredicted RBP9.12□□□□□ -0.95
SKA2-208ENST00000583927 PROK2Q9HC23 129 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 RRAGDQ9NQL2 400 aaPredicted RBP9.12□□□□□ -0.95
SKA2-208ENST00000583927 HEY2Q9UBP5 337 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 RAB21Q9UL25 225 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 DLGAP4Q9Y2H0 992 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 CCL27Q9Y4X3 112 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 NPFFR2Q9Y5X5 522 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 ZNF780BQ9Y6R6 833 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 ABCA12Q86UK0 2595 aa9.12□□□□□ -0.95
SKA2-208ENST00000583927 GNG14A0A1W2PPG7 69 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 TLDC2A0PJX2 215 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 PINLYPA6NC86 204 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 SMIM23A6NLE4 172 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 CYSRT1A8MQ03 144 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 TP53I11O14683 189 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 TO15178 435 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 ACOX3O15254 700 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 PLOD3O60568 738 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 ERAL1O75616 437 aaKnown RBP9.11□□□□□ -0.95
SKA2-208ENST00000583927 CBX7O95931 251 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 FGF4P08620 206 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 IL3P08700 152 aa9.11□□□□□ -0.95
SKA2-208ENST00000583927 ANXA4P09525 319 aaPredicted RBP9.11□□□□□ -0.95
SKA2-208ENST00000583927 ABOP16442 354 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms