RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	EIPR1	Q53HC9	387 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	DCST1	Q5T197	706 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	CDC20B	Q86Y33	519 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	LACC1	Q8IV20	430 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	ATP6V1E2	Q96A05	226 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	HSPBAP1	Q96EW2	488 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	LRRC46	Q96FV0	321 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	POM121	Q96HA1	1249 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	RAB17	Q9H0T7	212 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	VPS11	Q9H270	941 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	CXXC4	Q9H2H0	198 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	EPB41L4B	Q9H329	900 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	NOL11	Q9H8H0	719 aa	Known RBP	13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	MTRF1L	Q9UGC7	380 aa	Known RBP	13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	CBLC	Q9ULV8	474 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	C15orf41	Q9Y2V0	281 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	PCDHGB3	Q9Y5G1	929 aa		13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.86	□□□□□ -0.19
SREBF1-222	ENST00000583732	SPG11	Q96JI7	2443 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	NF1	P21359	2839 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	AHRR	A9YTQ3	701 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	OR7A17	O14581	309 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	EEF1E1	O43324	174 aa	Known RBP	13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	UGDH	O60701	494 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	KLHL2	O95198	593 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	CLDN9	O95484	217 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	IL2RA	P01589	272 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	HPN	P05981	417 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	KLK1	P06870	262 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	KRT15	P19012	456 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	KLK2	P20151	261 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	CEACAM8	P31997	349 aa	Predicted RBP	13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	GALNS	P34059	522 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	TMED10	P49755	219 aa	Known RBP	13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	CCNG1	P51959	295 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	ZNF136	P52737	540 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	NRG3	P56975	720 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	ACAP2	Q15057	778 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.85	□□□□□ -0.19	2e-9	■■□□□ 12.4
SREBF1-222	ENST00000583732	FNDC7	Q5VTL7	733 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	TTC19	Q6DKK2	380 aa	Predicted RBP	13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	DESI1	Q6ICB0	168 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	KLC3	Q6P597	504 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	PACS2	Q86VP3	889 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	PM20D2	Q8IYS1	436 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	ZNF615	Q8N8J6	731 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	L3MBTL4	Q8NA19	623 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	OR52B6	Q8NGF0	335 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	TP53INP1	Q96A56	240 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	PHF21B	Q96EK2	531 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	SERPINI1	Q99574	410 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	UGT2B28	Q9BY64	529 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	ANGPTL4	Q9BY76	406 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	MRPL1	Q9BYD6	325 aa	Known RBP	13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	BRINP2	Q9C0B6	783 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	PRDM14	Q9GZV8	571 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	UBQLN3	Q9H347	655 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	DTX4	Q9Y2E6	619 aa		13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	PRRC2A	P48634	2157 aa	Known RBP	13.85	□□□□□ -0.19
SREBF1-222	ENST00000583732	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	ESYT3	A0FGR9	886 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	HMX2	A2RU54	273 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	ANKRD33B	A6NCL7	494 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	C2orf72	A6NCS6	295 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	BMP7	P18075	431 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	GPX3	P22352	226 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	TYK2	P29597	1187 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	CASP3	P42574	277 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	SERPINB8	P50452	374 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	XK	P51811	444 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	DGKQ	P52824	942 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	RPP38	P78345	283 aa	Known RBP	13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	FUT7	Q11130	342 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	FOXD4	Q12950	439 aa	Predicted RBP	13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	SGO1	Q5FBB7	561 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	TECRL	Q5HYJ1	363 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	UBAP2	Q5T6F2	1119 aa	Known RBP	13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	FAM219B	Q5XKK7	198 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	POMZP3	Q6PJE2	187 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	ANGPTL8	Q6UXH0	198 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	YRDC	Q86U90	279 aa	Known RBP	13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	PLD6	Q8N2A8	252 aa	Known RBP	13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	OR4K14	Q8NGD5	310 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	FAM222B	Q8WU58	562 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	ADIPOR1	Q96A54	375 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	GPR78	Q96P69	363 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	ITPA	Q9BY32	194 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	NXF5	Q9H1B4	397 aa	Known RBP	13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	METTL7A	Q9H8H3	244 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	BCAP29	Q9UHQ4	241 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	TNPO3	Q9Y5L0	923 aa	Known RBP	13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	ITPR3	Q14573	2671 aa		13.84	□□□□□ -0.19
SREBF1-222	ENST00000583732	FOXE1	O00358	373 aa	Predicted RBP	13.83	□□□□□ -0.2
SREBF1-222	ENST00000583732	SEMA3D	O95025	777 aa		13.83	□□□□□ -0.2
SREBF1-222	ENST00000583732	SNX4	O95219	450 aa		13.83	□□□□□ -0.2
SREBF1-222	ENST00000583732	CPM	P14384	443 aa		13.83	□□□□□ -0.2
SREBF1-222	ENST00000583732	ABCD3	P28288	659 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms