RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 CNRIP1Q96F85 164 aaPredicted RBP23.05■■□□□ 1.28
TSEN54-209ENST00000583454 PPP3R2Q96LZ3 170 aa23.05■■□□□ 1.28
TSEN54-209ENST00000583454 PFDN4Q9NQP4 134 aa23.05■■□□□ 1.28
TSEN54-209ENST00000583454 COPS7AQ9UBW8 275 aa23.05■■□□□ 1.28
TSEN54-209ENST00000583454 UTS2RQ9UKP6 389 aa23.05■■□□□ 1.28
TSEN54-209ENST00000583454 EXO1Q9UQ84 846 aaKnown RBP23.05■■□□□ 1.28
TSEN54-209ENST00000583454 NCOA6Q14686 2063 aaPredicted RBP23.05■■□□□ 1.28
TSEN54-209ENST00000583454 ERAL1O75616 437 aaKnown RBP23.04■■□□□ 1.28
TSEN54-209ENST00000583454 ATP1B1P05026 303 aa23.04■■□□□ 1.28
TSEN54-209ENST00000583454 DDCP20711 480 aa23.04■■□□□ 1.28
TSEN54-209ENST00000583454 TACR1P25103 407 aa23.04■■□□□ 1.28
TSEN54-209ENST00000583454 FEN1P39748 380 aaKnown RBP23.04■■□□□ 1.28
TSEN54-209ENST00000583454 RNF4P78317 190 aa23.04■■□□□ 1.28
TSEN54-209ENST00000583454 ZNF267Q14586 743 aaPredicted RBP23.04■■□□□ 1.28
TSEN54-209ENST00000583454 IKBIPQ70UQ0 350 aa23.04■■□□□ 1.28
TSEN54-209ENST00000583454 TRIM42Q8IWZ5 723 aa23.04■■□□□ 1.28
TSEN54-209ENST00000583454 THAP1Q9NVV9 213 aa23.04■■□□□ 1.28
TSEN54-209ENST00000583454 TAS2R7Q9NYW3 318 aa23.04■■□□□ 1.28
TSEN54-209ENST00000583454 ZNF780BQ9Y6R6 833 aa23.04■■□□□ 1.28
TSEN54-209ENST00000583454 ADGRG4Q8IZF6 3080 aa23.04■■□□□ 1.28
TSEN54-209ENST00000583454 GABRR3A8MPY1 467 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 SKAP2O75563 359 aaPredicted RBP23.03■■□□□ 1.28
TSEN54-209ENST00000583454 RASAL1O95294 804 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 TRHRP34981 398 aaPredicted RBP23.03■■□□□ 1.28
TSEN54-209ENST00000583454 CD96P40200 585 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 ERVK-8P63133 956 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 RPL38P63173 70 aaKnown RBP23.03■■□□□ 1.28
TSEN54-209ENST00000583454 PMP22Q01453 160 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 DUSP2Q05923 314 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 MGAT2Q10469 447 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 FUT7Q11130 342 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 TUBA3CQ13748 450 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 CEBPEQ15744 281 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 GALNTL6Q49A17 601 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 ATG16L1Q676U5 607 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 TUBA3EQ6PEY2 450 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 GFRALQ6UXV0 394 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 SAMD14Q8IZD0 417 aaPredicted RBP23.03■■□□□ 1.28
TSEN54-209ENST00000583454 SLC34A3Q8N130 599 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 DNAJB8Q8NHS0 232 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 DOK4Q8TEW6 326 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 THAP3Q8WTV1 239 aaPredicted RBP23.03■■□□□ 1.28
TSEN54-209ENST00000583454 EGLN2Q96KS0 407 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 CNPPD1Q9BV87 410 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 MANSC1Q9H8J5 431 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 TRIM45Q9H8W5 580 aaPredicted RBP23.03■■□□□ 1.28
TSEN54-209ENST00000583454 ZNF446Q9NWS9 450 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 ERVK-19Q9WJR5 959 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 ENTPD4Q9Y227 616 aa23.03■■□□□ 1.28
TSEN54-209ENST00000583454 TEP1Q99973 2627 aaKnown RBP23.02■■□□□ 1.28
TSEN54-209ENST00000583454 ATP6AP2A0A1C7CYW4 349 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 ATP6AP2O75787 350 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 CLPSP04118 112 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 JUNP05412 331 aaKnown RBP23.02■■□□□ 1.28
TSEN54-209ENST00000583454 CT62P0C5K7 136 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 PRF1P14222 555 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 SDC1P18827 310 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 MAP4K2Q12851 820 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 C6orf136Q5SQH8 315 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 GALNT12Q8IXK2 581 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 MDS2Q8NDY4 140 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 OR5L2Q8NGL0 311 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 UTP23Q9BRU9 249 aaKnown RBP23.02■■□□□ 1.28
TSEN54-209ENST00000583454 SLC35C2Q9NQQ7 365 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 PNPOQ9NVS9 261 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.02■■□□□ 1.28
TSEN54-209ENST00000583454 MYOTQ9UBF9 498 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 GIMAP2Q9UG22 337 aa23.02■■□□□ 1.28
TSEN54-209ENST00000583454 YARS2Q9Y2Z4 477 aaKnown RBP23.02■■□□□ 1.28
TSEN54-209ENST00000583454 PKDREJQ9NTG1 2253 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 FCHO1O14526 889 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 KLF11O14901 512 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 PEX11AO75192 247 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 UNC5CO95185 931 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 CRYABP02511 175 aaKnown RBP23.01■■□□□ 1.27
TSEN54-209ENST00000583454 BCKDHAP12694 445 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 S1PR1P21453 382 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 NT5EP21589 574 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 SOX18P35713 384 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 HK2P52789 917 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 SLC37A1P57057 533 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 PRSS53Q2L4Q9 553 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 PRICKLE4Q2TBC4 344 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 ATP6AP1LQ52LC2 224 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 ZNF468Q5VIY5 522 aaPredicted RBP23.01■■□□□ 1.27
TSEN54-209ENST00000583454 FAM180BQ6P0A1 224 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 LRRC25Q8N386 305 aaPredicted RBP23.01■■□□□ 1.27
TSEN54-209ENST00000583454 CDC26Q8NHZ8 85 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 ITLN2Q8WWU7 325 aaPredicted RBP23.01■■□□□ 1.27
TSEN54-209ENST00000583454 SIGLEC12Q96PQ1 595 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 PCDHGB6Q9Y5F9 930 aa23.01■■□□□ 1.27
TSEN54-209ENST00000583454 AKAP9Q99996 3911 aa23■■□□□ 1.27
TSEN54-209ENST00000583454 ITGA10O75578 1167 aa23■■□□□ 1.27
TSEN54-209ENST00000583454 ST13P50502 369 aaKnown RBP23■■□□□ 1.27
TSEN54-209ENST00000583454 HLCSP50747 726 aa23■■□□□ 1.27
TSEN54-209ENST00000583454 ZNF766Q5HY98 468 aa23■■□□□ 1.27
TSEN54-209ENST00000583454 C16orf47Q6ZP98 133 aaPredicted RBP23■■□□□ 1.27
TSEN54-209ENST00000583454 C9orf40Q8IXQ3 194 aa23■■□□□ 1.27
TSEN54-209ENST00000583454 ZNF615Q8N8J6 731 aa23■■□□□ 1.27
TSEN54-209ENST00000583454 NUBPLQ8TB37 319 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms