RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 FRAT2O75474 233 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 TRIM16O95361 564 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 HPRP00739 348 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 CALCAP01258 141 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 FOSL2P15408 326 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 PPP2R1BP30154 601 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 OXTRP30559 389 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 SPRP35270 261 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 NPY2RP49146 381 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 CSRP3P50461 194 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 TKTL1P51854 596 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 BTG3Q14201 252 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 EMC2Q15006 297 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 HKDC1Q2TB90 917 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 AGKQ53H12 422 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 RAET1GQ6H3X3 334 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 IRGCQ6NXR0 463 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 STEAP1BQ6NZ63 245 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 DOK6Q6PKX4 331 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 STXBP4Q6ZWJ1 553 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 TMUB2Q71RG4 321 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 GOLGA7Q7Z5G4 137 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 SYVN1Q86TM6 617 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 ZNF781Q8N8C0 355 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 SAMD12Q8N8I0 201 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 CHDHQ8NE62 594 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 CCDC110Q8TBZ0 833 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 MIPOL1Q8TD10 442 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 TAF4BQ92750 862 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 NABP1Q96AH0 204 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 ZNF689Q96CS4 500 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 TSPAN18Q96SJ8 248 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 CHCHD5Q9BSY4 110 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 NDUFAF3Q9BU61 184 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 RBM24Q9BX46 236 aaKnown RBP3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 TRIM15Q9C019 465 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 NT5DC2Q9H857 520 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 JPT2Q9H910 190 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 Q9HAA7 133 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 THAP10Q9P2Z0 257 aaPredicted RBP3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 CTSZQ9UBR2 303 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 SLC9A8Q9Y2E8 581 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 MOB4Q9Y3A3 225 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 ZNF175Q9Y473 711 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 CLCA3PQ9Y6N3 262 aa3.05□□□□□ -1.92
SMCHD1-209ENST00000583441 KIF7Q2M1P5 1343 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 A0A0A6YYD4 124 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 EPM2AB3EWF7 344 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 C19orf81C9J6K1 198 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 K7EQG2 157 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 SORBS2O94875 1100 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 POP4O95707 220 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 GHRP10912 638 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 PRG2P13727 222 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 DNAJB1P25685 340 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 LMO2P25791 158 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 AKT2P31751 481 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 ID1P41134 155 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 SLC1A4P43007 532 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 CAMLGP49069 296 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 GPC3P51654 580 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 NDUFV3P56181 108 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 SLC26A5P58743 744 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 RPS4XP62701 263 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 HERVK_113P63132 956 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 ERVK-8P63133 956 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 HTD2P86397 168 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 FCHO2Q0JRZ9 810 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 ENPP2Q13822 863 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 DPYSQ14117 519 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 CLPPQ16740 277 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 ACSF3Q4G176 576 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 DPY19L2P2Q6ZN68 376 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 MOB2Q70IA6 237 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 CATSPER4Q7RTX7 472 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 ZNF440Q8IYI8 595 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 PYROXD2Q8N2H3 581 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 CHPT1Q8WUD6 406 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 NCLNQ969V3 563 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 PINX1Q96BK5 328 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 C18orf12Q96KH6 178 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 ZNF599Q96NL3 588 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 CPXM1Q96SM3 734 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 IWS1Q96ST2 819 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 RAB11FIP5Q9BXF6 653 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 ERVK-6Q9BXR3 956 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 ELL3Q9HB65 397 aaPredicted RBP3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 POLE3Q9NRF9 147 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 SOHLH2Q9NX45 425 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 TAS2R3Q9NYW6 316 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 CNOT2Q9NZN8 540 aaKnown RBP3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 EPS15L1Q9UBC2 864 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 CLIP2Q9UDT6 1046 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 SEC14L4Q9UDX3 406 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 MIOXQ9UGB7 285 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 SPATA2Q9UM82 520 aa3.04□□□□□ -1.92
SMCHD1-209ENST00000583441 PTPRUQ92729 1446 aa3.03□□□□□ -1.92
SMCHD1-209ENST00000583441 ZMYM6O95789 1325 aa3.03□□□□□ -1.92
SMCHD1-209ENST00000583441 FAM205AQ6ZU69 1335 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms