RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 CCDC159P0C7I6 412 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 FOSL2P15408 326 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 LMO2P25791 158 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 CALML3P27482 149 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 RPA1P27694 616 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 SPRP35270 261 aaPredicted RBP3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 GSK3BP49841 420 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 AGKQ53H12 422 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 C9orf66Q5T8R8 295 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 EMBQ6PCB8 327 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 TMEM26Q6ZUK4 368 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 GPR142Q7Z601 462 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 P2RY8Q86VZ1 359 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 KDM8Q8N371 416 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 C4orf32Q8N8J7 132 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 MRPL43Q8N983 215 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 SAMD8Q96LT4 415 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 ACCSQ96QU6 501 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 ATOH8Q96SQ7 321 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 SOSTQ9BQB4 213 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 C1orf21Q9H246 121 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 HSD3B7Q9H2F3 369 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 ADNPQ9H2P0 1102 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 Q9HAA7 133 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 IL1RL2Q9HB29 575 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 CNOT2Q9NZN8 540 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 LHX3Q9UBR4 397 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 TUBGCP4Q9UGJ1 667 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 HOOK1Q9UJC3 728 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 KLK13Q9UKR3 277 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 IKZF3Q9UKT9 509 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 SPATA2Q9UM82 520 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 ZNF175Q9Y473 711 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 ATG4BQ9Y4P1 393 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 CPQQ9Y646 472 aa3.77□□□□□ -1.81
SMCHD1-205ENST00000581383 ZMYM6O95789 1325 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 SHISA9B4DS77 424 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 ARPC1BO15143 372 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 ADAM12O43184 909 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 TXNL1O43396 289 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 SEMA4FO95754 770 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 IGHV3-13P01766 116 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 PRELPP51888 382 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 RAG2P55895 527 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 SLC26A5P58743 744 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 BPIFB3P59826 476 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 GSTO1P78417 241 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 NME3Q13232 169 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 KARSQ15046 597 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 TMEM44Q2T9K0 475 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 ZNF528Q3MIS6 628 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 TOR1AIP1Q5JTV8 583 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 AGAP7PQ5VUJ5 663 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 WDR25Q64LD2 544 aaPredicted RBP3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 RHBDD2Q6NTF9 364 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 CWC27Q6UX04 472 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 ZNF841Q6ZN19 808 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 PHC2Q8IXK0 858 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 COLGALT1Q8NBJ5 622 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 OR4Q3Q8NH05 313 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 RASL10AQ92737 203 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 RAB3CQ96E17 227 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 GNB4Q9HAV0 340 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 ELL3Q9HB65 397 aaPredicted RBP3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 NRN1Q9NPD7 142 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 SEC14L4Q9UDX3 406 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 MIOXQ9UGB7 285 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 IL20RAQ9UHF4 553 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 PLEKHA6Q9Y2H5 1048 aa3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 TP53BP1Q12888 1972 aaPredicted RBP3.76□□□□□ -1.81
SMCHD1-205ENST00000581383 A0A1W2PPR1 153 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 BCLAF3A2AJT9 711 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 RNF212BA8MTL3 300 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 CFLARO15519 480 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 SSX5O60225 188 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 PTBP3O95758 552 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 OAS1P00973 400 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 HCKP08631 526 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 FCGR3AP08637 254 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 GHRP10912 638 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 CYP11B1P15538 503 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 CAPN2P17655 700 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 CCNA2P20248 432 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 IL10P22301 178 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 TMOD1P28289 359 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 MAT2AP31153 395 aaKnown RBP3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 SLC6A8P48029 635 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 NUMBP49757 651 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 MYBPC1Q00872 1141 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 ZKSCAN8Q15776 578 aaPredicted RBP3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 LPAL2Q16609 132 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 HAGHQ16775 308 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 LDLRAP1Q5SW96 308 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 FAM182AQ5T1J6 154 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 IL23RQ5VWK5 629 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 ZCCHC12Q6PEW1 402 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 SH2D6Q7Z4S9 175 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 LUZP1Q86V48 1076 aa3.75□□□□□ -1.81
SMCHD1-205ENST00000581383 SLC47A2Q86VL8 602 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms