RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 SETDB1Q15047 1291 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 RPS6KA2Q15349 733 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 PCBP2Q15366 365 aaKnown RBP eCLIP9.74□□□□□ -0.853e-8■■■■■ 30
CSNK1D-210ENST00000579308 RAPH1Q70E73 1250 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 CAMKMTQ7Z624 323 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 TBC1D1Q86TI0 1168 aaPredicted RBP9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 CTAGE3PQ8IX95 158 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 PM20D2Q8IYS1 436 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 PPM1NQ8N819 430 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 C17orf47Q8NEP4 570 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 GOT1L1Q8NHS2 421 aaPredicted RBP9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 DIO2Q92813 273 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 ZNF597Q96LX8 424 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 RILPQ96NA2 401 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 GPR78Q96P69 363 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 NAPGQ99747 312 aaPredicted RBP9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 DPH5Q9H2P9 285 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 EPB41L4BQ9H329 900 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 PLEKHF2Q9H8W4 249 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 CALHM2Q9HA72 323 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 C15orf41Q9Y2V0 281 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 ACOT9Q9Y305 439 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 RNF11Q9Y3C5 154 aa9.74□□□□□ -0.85
CSNK1D-210ENST00000579308 MBD3L4A6NDZ8 208 aaPredicted RBP9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 MBD3L3A6NE82 208 aaPredicted RBP9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 MBD3L5A6NJ08 208 aaPredicted RBP9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 SYCE1LA8MT33 242 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 RAD51CO43502 376 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 IL18BPO95998 194 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 IL2RAP01589 272 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 C2P06681 752 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 ABCB1P08183 1280 aaPredicted RBP9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 CTSSP25774 331 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 SOX18P35713 384 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 ALDH18A1P54886 795 aaKnown RBP9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 IRF9Q00978 393 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 MGAT2Q10469 447 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 CALCOCO2Q13137 446 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 SF3B4Q15427 424 aaKnown RBP eCLIP9.73□□□□□ -0.851e-21■■□□□ 13.4
CSNK1D-210ENST00000579308 CPSF6Q16630 551 aaKnown RBP eCLIP9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 PFKFB4Q16877 469 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 EIPR1Q53HC9 387 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 DCST1Q5T197 706 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 TIGD3Q6B0B8 471 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 METTL2BQ6P1Q9 378 aaKnown RBP9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 CYP20A1Q6UW02 462 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 PAMR1Q6UXH9 720 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 CCDC91Q7Z6B0 441 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 PACS2Q86VP3 889 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 OR7G1Q8NGA0 311 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 MBD3L2Q8NHZ7 208 aaPredicted RBP9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 FBF1Q8TES7 1133 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 KCTD4Q8WVF5 259 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 REPS1Q96D71 796 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 LRRC46Q96FV0 321 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 TMEM41AQ96HV5 264 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 UGT2B28Q9BY64 529 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 OR10A5Q9H207 317 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 ACTR8Q9H981 624 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 SNX15Q9NRS6 342 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 TEX10Q9NXF1 929 aaPredicted RBP9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 SLC6A5Q9Y345 797 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 FLNAP21333 2647 aaKnown RBP9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 EML6Q6ZMW3 1958 aa9.73□□□□□ -0.85
CSNK1D-210ENST00000579308 A0A087X1B8 175 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 TUBAL3A6NHL2 446 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 OR7A17O14581 309 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 SEMA3DO95025 777 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 GBAP04062 536 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 CPN1P15169 458 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 NAGAP17050 411 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 TACR1P25103 407 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 ABCD3P28288 659 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 PTPN6P29350 595 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 HOXC12P31275 282 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 MAGEA4P43358 317 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 XKP51811 444 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 AGFG1P52594 562 aaKnown RBP9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 DGKQP52824 942 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 NAGLUP54802 743 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 SORDQ00796 357 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 NAB1Q13506 487 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 GTF2H2Q13888 395 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 SLMAPQ14BN4 828 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 ACAP2Q15057 778 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 TRADDQ15628 312 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 FAM83EQ2M2I3 478 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 DEFB113Q30KQ7 82 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 OR52E8Q6IFG1 317 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 GTF2H2CQ6P1K8 395 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 TMEM81Q6P7N7 255 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 ZDHHC24Q6UX98 284 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 GOLGA7Q7Z5G4 137 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 ADGRE4PQ86SQ3 457 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 KIF18BQ86Y91 864 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 MYLK4Q86YV6 388 aaPredicted RBP9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 GALNT12Q8IXK2 581 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 MMP21Q8N119 569 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 C9orf106Q8NAJ2 232 aa9.72□□□□□ -0.85
CSNK1D-210ENST00000579308 SPATA4Q8NEY3 305 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms