RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 METTL4Q8N3J2 472 aa16.12■□□□□ 0.17
SLC9A3R1-203ENST00000578958 OR7G1Q8NGA0 311 aa16.12■□□□□ 0.17
SLC9A3R1-203ENST00000578958 TRPC4APQ8TEL6 797 aa16.12■□□□□ 0.17
SLC9A3R1-203ENST00000578958 ZNF483Q8TF39 744 aaPredicted RBP16.12■□□□□ 0.17
SLC9A3R1-203ENST00000578958 MTBPQ96DY7 904 aa16.12■□□□□ 0.17
SLC9A3R1-203ENST00000578958 FAIM2Q9BWQ8 316 aa16.12■□□□□ 0.17
SLC9A3R1-203ENST00000578958 BRF2Q9HAW0 419 aa16.12■□□□□ 0.17
SLC9A3R1-203ENST00000578958 SLC24A3Q9HC58 644 aa16.12■□□□□ 0.17
SLC9A3R1-203ENST00000578958 MCCC2Q9HCC0 563 aa16.12■□□□□ 0.17
SLC9A3R1-203ENST00000578958 FARSBQ9NSD9 589 aaKnown RBP16.12■□□□□ 0.17
SLC9A3R1-203ENST00000578958 BCAP29Q9UHQ4 241 aa16.12■□□□□ 0.17
SLC9A3R1-203ENST00000578958 CFL2Q9Y281 166 aa16.12■□□□□ 0.17
SLC9A3R1-203ENST00000578958 EML6Q6ZMW3 1958 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 C15orf38-AP3S2A0A0A6YYH1 394 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 A0A1W2PS29 197 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 A8MT66 165 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 SUPT7LO94864 414 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 SNX4O95219 450 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 KRT6AP02538 564 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 KRT6BP04259 564 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 RFPL3SP0C7P2 107 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 KRT6CP48668 564 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 ALDH9A1P49189 494 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 FBXW4P57775 412 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 FUT7Q11130 342 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 LETMD1Q6P1Q0 360 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 ADGRD1Q6QNK2 874 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 LRRC25Q8N386 305 aaPredicted RBP16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 VWA5B2Q8N398 1253 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 NEIL3Q8TAT5 605 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 SLC6A15Q9H2J7 730 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 ACKR4Q9NPB9 350 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 PFDN4Q9NQP4 134 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 SPRR3Q9UBC9 169 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 TRPS1Q9UHF7 1281 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 CNOT11Q9UKZ1 510 aaKnown RBP16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 PCDHA9Q9Y5H5 950 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 ZNF780BQ9Y6R6 833 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 DNAJC13O75165 2243 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 FBN2P35556 2912 aa16.11■□□□□ 0.17
SLC9A3R1-203ENST00000578958 ADGRG4Q8IZF6 3080 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 DCHS2Q6V1P9 2916 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 ANKRD33BA6NCL7 494 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 KIF2AO00139 706 aaPredicted RBP16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 TOXO94900 526 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 OR4F21O95013 312 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 CLPSP04118 112 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 CT62P0C5K7 136 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 CSNK2A2P19784 350 aaPredicted RBP16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 MSX1P28360 303 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 HMOX2P30519 316 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 FEN1P39748 380 aaKnown RBP16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 CLCQ05315 142 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 MYBPHQ13203 477 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 RASA2Q15283 850 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 CES4AQ5XG92 561 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 SLC48A1Q6P1K1 146 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 WDR53Q7Z5U6 358 aaPredicted RBP16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 IFT20Q8IY31 132 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 PRR22Q8IZ63 422 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 KLHL29Q96CT2 875 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 RILPQ96NA2 401 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 SECISBP2Q96T21 854 aaKnown RBP16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 ZNF559Q9BR84 538 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 VPS29Q9UBQ0 182 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 NFU1Q9UMS0 254 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 FAM215AQ9Y5M1 114 aa16.1■□□□□ 0.17
SLC9A3R1-203ENST00000578958 A0A0G2JNJ9 132 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 LRRC3CA6NJW4 275 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 PPP6CO00743 305 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 ECHS1P30084 290 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 HSD17B3P37058 310 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 RTL6Q6ICC9 239 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 TRMT10CQ7L0Y3 403 aaKnown RBP16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 CDH24Q86UP0 819 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 C1orf52Q8N6N3 182 aaKnown RBP16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 CEP112Q8N8E3 955 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 ZNF615Q8N8J6 731 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 CDYL2Q8N8U2 506 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 ZNF441Q8N8Z8 693 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 C17orf47Q8NEP4 570 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 KIF18AQ8NI77 898 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 SPPL2AQ8TCT8 520 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 HBEGFQ99075 208 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 C1QTNF3Q9BXJ4 246 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 METTL7AQ9H8H3 244 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 PROK2Q9HC23 129 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 NPDC1Q9NQX5 325 aaPredicted RBP16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 Q9UFV3 132 aa16.09■□□□□ 0.17
SLC9A3R1-203ENST00000578958 CCDC151A5D8V7 595 aa16.08■□□□□ 0.16
SLC9A3R1-203ENST00000578958 CDH16O75309 829 aa16.08■□□□□ 0.16
SLC9A3R1-203ENST00000578958 TRIM3O75382 744 aaPredicted RBP16.08■□□□□ 0.16
SLC9A3R1-203ENST00000578958 ULK1O75385 1050 aa16.08■□□□□ 0.16
SLC9A3R1-203ENST00000578958 ABHD2P08910 425 aa16.08■□□□□ 0.16
SLC9A3R1-203ENST00000578958 HSD3B1P14060 373 aa16.08■□□□□ 0.16
SLC9A3R1-203ENST00000578958 ENDOUP21128 410 aaKnown RBP16.08■□□□□ 0.16
SLC9A3R1-203ENST00000578958 HSD3B2P26439 372 aa16.08■□□□□ 0.16
SLC9A3R1-203ENST00000578958 KRTAP10-9P60411 292 aa16.08■□□□□ 0.16
SLC9A3R1-203ENST00000578958 TRA2BP62995 288 aaKnown RBP16.08■□□□□ 0.16
SLC9A3R1-203ENST00000578958 TFF3Q07654 80 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms