RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 GHDCQ8N2G8 530 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 ANKRD42Q8N9B4 389 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 POGLUT1Q8NBL1 392 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 PPP1R14CQ8TAE6 165 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 AGR3Q8TD06 166 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 KLHL29Q96CT2 875 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 FRMD6Q96NE9 622 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 VIPAS39Q9H9C1 493 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 CXorf21Q9HAI6 301 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 LRTM1Q9HBL6 345 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 MYNNQ9NPC7 610 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 C1orf109Q9NX04 203 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 EHD3Q9NZN3 535 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 COPS7AQ9UBW8 275 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 ZDHHC2Q9UIJ5 367 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 NPIPA1Q9UND3 350 aa11.84□□□□□ -0.51
CCDC57-211ENST00000578187 KLF13Q9Y2Y9 288 aaPredicted RBP11.84□□□□□ -0.51
CCDC57-211ENST00000578187 POLR3HQ9Y535 204 aaPredicted RBP11.84□□□□□ -0.51
CCDC57-211ENST00000578187 KLRC4-KLRK1H3BQV0 150 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 HRKO00198 91 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 PIP5K1BO14986 540 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 LSM1O15116 133 aaKnown RBP11.83□□□□□ -0.52
CCDC57-211ENST00000578187 ITM2AO43736 263 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 NME2P1O60361 137 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 LYPLA1O75608 230 aaPredicted RBP11.83□□□□□ -0.52
CCDC57-211ENST00000578187 NEURL1O76050 574 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 SNUPNO95149 360 aaKnown RBP11.83□□□□□ -0.52
CCDC57-211ENST00000578187 HSPA4LO95757 839 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 CLPSP04118 112 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 ATP1B1P05026 303 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 LINC00032P0C843 101 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 COX6B1P14854 86 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 AGAP20933 346 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 BGNP21810 368 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 NME2P22392 152 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 HTR1EP28566 365 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 PTGER4P35408 488 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 ALDH9A1P49189 494 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 HLCSP50747 726 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 XKP51811 444 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 HK2P52789 917 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 ABCE1P61221 599 aaKnown RBP11.83□□□□□ -0.52
CCDC57-211ENST00000578187 ERVK-8P63133 956 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 RNF4P78317 190 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 HEPACAMQ14CZ8 416 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 HHATQ5VTY9 493 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 FAM71E1Q6IPT2 247 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 NOXRED1Q6NXP6 359 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 IKBIPQ70UQ0 350 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 HDXQ7Z353 690 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 SPPL2CQ8IUH8 684 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 MCEMP1Q8IX19 187 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 DDIASQ8IXT1 998 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 TMEM156Q8N614 296 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 NUBPLQ8TB37 319 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 RIT1Q92963 219 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 ARL8AQ96BM9 186 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 CNRIP1Q96F85 164 aaPredicted RBP11.83□□□□□ -0.52
CCDC57-211ENST00000578187 SENP5Q96HI0 755 aaPredicted RBP11.83□□□□□ -0.52
CCDC57-211ENST00000578187 ZNF681Q96N22 645 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 SORT1Q99523 831 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 SH3GL2Q99962 352 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 HES7Q9BYE0 225 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 TSPAN10Q9H1Z9 355 aaPredicted RBP11.83□□□□□ -0.52
CCDC57-211ENST00000578187 TRIM45Q9H8W5 580 aaPredicted RBP11.83□□□□□ -0.52
CCDC57-211ENST00000578187 PLSCR2Q9NRY7 297 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 MYOTQ9UBF9 498 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 HAO1Q9UJM8 370 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 UTS2RQ9UKP6 389 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 ERVK-19Q9WJR5 959 aa11.83□□□□□ -0.52
CCDC57-211ENST00000578187 WBP11Q9Y2W2 641 aaKnown RBP11.83□□□□□ -0.52
CCDC57-211ENST00000578187 PRRG2O14669 202 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 TFECO14948 347 aaPredicted RBP11.82□□□□□ -0.52
CCDC57-211ENST00000578187 ASNA1O43681 348 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 SEC22BO75396 215 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 SKAP2O75563 359 aaPredicted RBP11.82□□□□□ -0.52
CCDC57-211ENST00000578187 ITGA10O75578 1167 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 ERAL1O75616 437 aaKnown RBP11.82□□□□□ -0.52
CCDC57-211ENST00000578187 CT62P0C5K7 136 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 PORP16435 677 aaPredicted RBP11.82□□□□□ -0.52
CCDC57-211ENST00000578187 CSNK2A2P19784 350 aaPredicted RBP11.82□□□□□ -0.52
CCDC57-211ENST00000578187 DDCP20711 480 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 SLC1A6P48664 564 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 SLC37A1P57057 533 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 RPL38P63173 70 aaKnown RBP11.82□□□□□ -0.52
CCDC57-211ENST00000578187 DUSP2Q05923 314 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 FUT7Q11130 342 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 CEBPEQ15744 281 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 C3AR1Q16581 482 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 ZNF630Q2M218 657 aaPredicted RBP11.82□□□□□ -0.52
CCDC57-211ENST00000578187 ZNF750Q32MQ0 723 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 ZNF468Q5VIY5 522 aaPredicted RBP11.82□□□□□ -0.52
CCDC57-211ENST00000578187 CRYBG3Q68DQ2 2970 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 GDF7Q7Z4P5 450 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 ZNF227Q86WZ6 799 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 GALNT12Q8IXK2 581 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 C9orf40Q8IXQ3 194 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 ZNF781Q8N8C0 355 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 CCT7Q99832 543 aa11.82□□□□□ -0.52
CCDC57-211ENST00000578187 CNPPD1Q9BV87 410 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms