RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 SCELO95171 688 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 KRT75O95678 551 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 GSNP06396 782 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 C8BP07358 591 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 FAM58BPP0C7Q3 252 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 PIM1P11309 404 aaPredicted RBP9.55□□□□□ -0.88
SS18-207ENST00000577636 FCGR1AP12314 374 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 CDH3P22223 829 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 HIST1H1TP22492 207 aaPredicted RBP9.55□□□□□ -0.88
SS18-207ENST00000577636 SLC7A1P30825 629 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 SKP1P63208 163 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 ATP1A4Q13733 1029 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 ADPRMQ3LIE5 342 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 SPDYE7PQ495Y7 208 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 ZC3H12BQ5HYM0 836 aaKnown RBP9.55□□□□□ -0.88
SS18-207ENST00000577636 GLYATQ6IB77 296 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 ANKRD26P1Q6NSI1 321 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 TRIM73Q86UV7 250 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 SPPL2CQ8IUH8 684 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 FAM20CQ8IXL6 584 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 ZCCHC7Q8N3Z6 543 aaKnown RBP9.55□□□□□ -0.88
SS18-207ENST00000577636 D2HGDHQ8N465 521 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 TMEM102Q8N9M5 508 aaPredicted RBP9.55□□□□□ -0.88
SS18-207ENST00000577636 OR10A6Q8NH74 314 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 ZFP28Q8NHY6 868 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.55□□□□□ -0.88
SS18-207ENST00000577636 NT5CQ8TCD5 201 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 ADAMTS17Q8TE56 1095 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 NUDT8Q8WV74 236 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 NCLNQ969V3 563 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 FAM162AQ96A26 154 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 MARVELD3Q96A59 401 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 PPWD1Q96BP3 646 aaKnown RBP9.55□□□□□ -0.88
SS18-207ENST00000577636 ZNF501Q96CX3 271 aaPredicted RBP9.55□□□□□ -0.88
SS18-207ENST00000577636 MS4A6EQ96DS6 147 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 ZNF764Q96H86 408 aaPredicted RBP9.55□□□□□ -0.88
SS18-207ENST00000577636 SMAD5Q99717 465 aaKnown RBP9.55□□□□□ -0.88
SS18-207ENST00000577636 ZFYVE21Q9BQ24 234 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 TACO1Q9BSH4 297 aaKnown RBP9.55□□□□□ -0.88
SS18-207ENST00000577636 INPP5KQ9BT40 448 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 SPATA9Q9BWV2 254 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 PIF1Q9H611 641 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 SERHLQ9NQF3 203 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 PSME2Q9UL46 239 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 AURKCQ9UQB9 309 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 KLHL20Q9Y2M5 609 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 KLK4Q9Y5K2 254 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 SPACA6W5XKT8 324 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 ANKRD12Q6UB98 2062 aa9.55□□□□□ -0.88
SS18-207ENST00000577636 UNC79Q9P2D8 2635 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 TRBV5-3A0A0A0MS03 114 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 A0A0J9YVX5 310 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 TCRBV3S1A0A5B6 114 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 TLCD2A6NGC4 264 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 FAM220BPB1ANY3 271 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 RTCAO00442 366 aaKnown RBP9.54□□□□□ -0.88
SS18-207ENST00000577636 HNRNPRO43390 633 aaKnown RBP9.54□□□□□ -0.88
SS18-207ENST00000577636 ZBTB11O95625 1053 aaPredicted RBP9.54□□□□□ -0.88
SS18-207ENST00000577636 ABCB1P08183 1280 aaPredicted RBP9.54□□□□□ -0.88
SS18-207ENST00000577636 RAB40ALP0C0E4 278 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 NTSP30990 170 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 TLX1P31314 330 aaPredicted RBP9.54□□□□□ -0.88
SS18-207ENST00000577636 SOAT1P35610 550 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 CHI3L1P36222 383 aaPredicted RBP9.54□□□□□ -0.88
SS18-207ENST00000577636 RRADP55042 308 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 PHC1P78364 1004 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 SLAMF1Q13291 335 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 TRIP10Q15642 601 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 TBCELQ5QJ74 424 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 IRAK1BP1Q5VVH5 260 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 MLIPQ5VWP3 458 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 SP5Q6BEB4 398 aaPredicted RBP9.54□□□□□ -0.88
SS18-207ENST00000577636 NIPAL1Q6NVV3 410 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 ABHD17CQ6PCB6 329 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 ANGPTL8Q6UXH0 198 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 SERPINA11Q86U17 422 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 KMT5CQ86Y97 462 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 MICU2Q8IYU8 434 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 PQLC1Q8N2U9 271 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 ACOT4Q8N9L9 421 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 OR5P2Q8WZ92 322 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 FIG4Q92562 907 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 TM4SF18Q96CE8 201 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 ZBED6CLQ96FA7 236 aaPredicted RBP9.54□□□□□ -0.88
SS18-207ENST00000577636 DUS3LQ96G46 650 aaKnown RBP9.54□□□□□ -0.88
SS18-207ENST00000577636 REXO5Q96IC2 774 aaKnown RBP9.54□□□□□ -0.88
SS18-207ENST00000577636 CPPED1Q9BRF8 314 aaPredicted RBP9.54□□□□□ -0.88
SS18-207ENST00000577636 SORBS1Q9BX66 1292 aaKnown RBP9.54□□□□□ -0.88
SS18-207ENST00000577636 UGT2B28Q9BY64 529 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 TRIM8Q9BZR9 551 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 KLHL4Q9C0H6 718 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 SLC6A16Q9GZN6 736 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 KAT8Q9H7Z6 458 aaKnown RBP9.54□□□□□ -0.88
SS18-207ENST00000577636 FANCEQ9HB96 536 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 NEUROD4Q9HD90 331 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 MS4A12Q9NXJ0 267 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 TAS2R9Q9NYW1 312 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 SLC25A37Q9NYZ2 338 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 EHD3Q9NZN3 535 aa9.54□□□□□ -0.88
SS18-207ENST00000577636 SEMA5BQ9P283 1151 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms