RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 CPMP14384 443 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 PCSK2P16519 638 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 NT5EP21589 574 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 IL10P22301 178 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 PRPH2P23942 346 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 XKP51811 444 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 RRADP55042 308 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 PMP22Q01453 160 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 C2orf80Q0P641 193 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 MGAT2Q10469 447 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF267Q14586 743 aaPredicted RBP7.35□□□□□ -1.23
CCDC40-215ENST00000576033 ELAVL1Q15717 326 aaKnown RBP7.35□□□□□ -1.23
CCDC40-215ENST00000576033 C6orf136Q5SQH8 315 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 C10orf62Q5T681 223 aaPredicted RBP7.35□□□□□ -1.23
CCDC40-215ENST00000576033 IL23RQ5VWK5 629 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 SLC6A19Q695T7 634 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 DESI1Q6ICB0 168 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 GALNT18Q6P9A2 607 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 TMEM64Q6YI46 380 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 PAGE2Q7Z2X7 111 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 WDR53Q7Z5U6 358 aaPredicted RBP7.35□□□□□ -1.23
CCDC40-215ENST00000576033 PACS2Q86VP3 889 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 CCDC116Q8IYX3 515 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 FNDC5Q8NAU1 212 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 B3GNT7Q8NFL0 401 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 ADAMTS18Q8TE60 1221 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF721Q8TF20 911 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 KAT2AQ92830 837 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 TUBGCP3Q96CW5 907 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 OTUB1Q96FW1 271 aaPredicted RBP7.35□□□□□ -1.23
CCDC40-215ENST00000576033 TEX37Q96LM6 180 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 SIGLEC12Q96PQ1 595 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 LPAR4Q99677 370 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 SMAD5Q99717 465 aaKnown RBP7.35□□□□□ -1.23
CCDC40-215ENST00000576033 CDCP1Q9H5V8 836 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 MYNNQ9NPC7 610 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 PFDN4Q9NQP4 134 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 SDR39U1Q9NRG7 319 aaPredicted RBP7.35□□□□□ -1.23
CCDC40-215ENST00000576033 TMEM45AQ9NWC5 275 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 MAT2BQ9NZL9 334 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 UTS2RQ9UKP6 389 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 G3BP2Q9UN86 482 aaKnown RBP7.35□□□□□ -1.23
CCDC40-215ENST00000576033 MRPS33Q9Y291 106 aaKnown RBP7.35□□□□□ -1.23
CCDC40-215ENST00000576033 NTNG1Q9Y2I2 539 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 SPACA6W5XKT8 324 aa7.35□□□□□ -1.23
CCDC40-215ENST00000576033 A0A0G2JMM0 328 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 A0A1W2PPB8 328 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 A0A1W2PRS3 328 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 C1orf226A1L170 272 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 KIR3DP1A8MWS1 328 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 WWP2O00308 870 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 UBDO15205 165 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 ATP6V1G2O95670 118 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 WDPCPO95876 746 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 IGKV3-11P04433 115 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 G6PDP11413 515 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 LBPP18428 481 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 TNNI3P19429 210 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 NCF2P19878 526 aaPredicted RBP7.34□□□□□ -1.23
CCDC40-215ENST00000576033 DDCP20711 480 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 GPX3P22352 226 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 CPA2P48052 419 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 CDK9P50750 372 aaKnown RBP7.34□□□□□ -1.23
CCDC40-215ENST00000576033 NR0B1P51843 470 aaKnown RBP7.34□□□□□ -1.23
CCDC40-215ENST00000576033 ARFIP1P53367 373 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 PLIN5Q00G26 463 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 SMU1Q2TAY7 513 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 PRICKLE4Q2TBC4 344 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 ATP6AP1LQ52LC2 224 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 TRMT12Q53H54 448 aaKnown RBP7.34□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF628Q5EBL2 1059 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 TCTN3Q6NUS6 607 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 C8orf82Q6P1X6 216 aaPredicted RBP7.34□□□□□ -1.23
CCDC40-215ENST00000576033 TMEM107Q6UX40 140 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 HACD2Q6Y1H2 254 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF551Q7Z340 670 aaPredicted RBP7.34□□□□□ -1.23
CCDC40-215ENST00000576033 ZNF227Q86WZ6 799 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 SNX32Q86XE0 403 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 PRR22Q8IZ63 422 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 CLEC4FQ8N1N0 589 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 TMEM132CQ8N3T6 1108 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 POU5F2Q8N7G0 328 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 OR7A2PQ8NGA2 310 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 OR4K14Q8NGD5 310 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 FBXO30Q8TB52 745 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 IP6K3Q96PC2 410 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 GAL3ST4Q96RP7 486 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 FAM117AQ9C073 453 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 BRINP2Q9C0B6 783 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 SLC25A18Q9H1K4 315 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 DENND2DQ9H6A0 471 aaPredicted RBP7.34□□□□□ -1.23
CCDC40-215ENST00000576033 CXorf21Q9HAI6 301 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 CLK4Q9HAZ1 481 aaKnown RBP7.34□□□□□ -1.23
CCDC40-215ENST00000576033 MMP25Q9NPA2 562 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 SLC52A3Q9NQ40 469 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.34□□□□□ -1.23
CCDC40-215ENST00000576033 SIRT5Q9NXA8 310 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 MS4A12Q9NXJ0 267 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 AHSPQ9NZD4 102 aa7.34□□□□□ -1.23
CCDC40-215ENST00000576033 EHD3Q9NZN3 535 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms