RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 TOR4AQ9NXH8 423 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 P2RX2Q9UBL9 471 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 A0A0B4J293 547 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 NR2F6P10588 404 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 GPC1P35052 558 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 GPR1P46091 355 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 HOXC5Q00444 222 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 TLE2Q04725 743 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 SNAPC1Q16533 368 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 PLK5Q496M5 336 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 C3orf38Q5JPI3 329 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 FAM83HQ6ZRV2 1179 aaPredicted RBP16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 NOXA1Q86UR1 476 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 NATD1Q8N6N6 113 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 ZNF557Q8N988 423 aaPredicted RBP16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 UBASH3BQ8TF42 649 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 XAGE5Q8WWM1 108 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 GATAD2BQ8WXI9 593 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 TM9SF4Q92544 642 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 RNF31Q96EP0 1072 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 FRMD6Q96NE9 622 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 TM9SF2Q99805 663 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 GDF15Q99988 308 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 KATNB1Q9BVA0 655 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 RNF121Q9H920 327 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 ZSCAN32Q9NX65 697 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 SAGE1Q9NXZ1 904 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 TAC3Q9UHF0 121 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 FBXW2Q9UKT8 454 aa16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 MTCL1Q9Y4B5 1905 aaKnown RBP16.28■□□□□ 0.2
TOM1L1-221ENST00000575882 STK25O00506 426 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 TBX19O60806 448 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 ALPPP05187 535 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 TEAD2Q15562 447 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 CRTC2Q53ET0 693 aaPredicted RBP16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 KLHL22Q53GT1 634 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 CD300LDQ6UXZ3 194 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 C17orf64Q86WR6 236 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 UCN3Q969E3 161 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 ZBED6CLQ96FA7 236 aaPredicted RBP16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 OR51I1Q9H343 314 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 CTPS2Q9NRF8 586 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 MAN2C1Q9NTJ4 1040 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 TMEM98Q9Y2Y6 226 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 FEZF1A0PJY2 475 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 PLA2G10O15496 165 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 SPINT1O43278 529 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 SEC14L5O43304 696 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 RB1P06400 928 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 YES1P07947 543 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 NR2F1P10589 423 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 FRKP42685 505 aaPredicted RBP16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 KIR2DL3P43628 341 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 GAS1P54826 345 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 CDK5Q00535 292 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 CD83Q01151 205 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 NDUFA9Q16795 377 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 KIAA0907Q7Z7F0 614 aaPredicted RBP16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 TRIM48Q8IWZ4 208 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 ATP6V1C2Q8NEY4 427 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 OR52P1PQ8NH57 321 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 ENKURQ8TC29 256 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 FGF11Q92914 225 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 NUS1Q96E22 293 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 RNFT2Q96EX2 444 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 OTUB1Q96FW1 271 aaPredicted RBP16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 LRIG1Q96JA1 1093 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 MED18Q9BUE0 208 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 RHBGQ9H310 441 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 DPEP2Q9H4A9 486 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 ANKRA2Q9H9E1 313 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 KCNK12Q9HB15 430 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 TDP1Q9NUW8 608 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 CUEDC1Q9NWM3 386 aaPredicted RBP16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 TEX10Q9NXF1 929 aaPredicted RBP16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 TRPC4Q9UBN4 977 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 PRKAB1Q9Y478 270 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 WNT6Q9Y6F9 365 aa16.27■□□□□ 0.2
TOM1L1-221ENST00000575882 SLC30A4O14863 429 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 TMPRSS11DO60235 418 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 SMSP52788 366 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 CAV3P56539 151 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 EFNB1P98172 346 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 ZNF438Q7Z4V0 828 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 PDZD3Q86UT5 571 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 MEX3DQ86XN8 651 aaKnown RBP16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 KREMEN2Q8NCW0 462 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 AP3S1Q92572 193 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 RAD51AP1Q96B01 352 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 ZFYVE19Q96K21 471 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 SLC35G5Q96KT7 338 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 PLA2G12AQ9BZM1 189 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 LHX9Q9NQ69 397 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 SF3B6Q9Y3B4 125 aaKnown RBP16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 TPD52L2O43399 206 aaKnown RBP16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 ACADMP11310 421 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 KELP23276 732 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 MLLT3P42568 568 aaPredicted RBP16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 DEFB103AP81534 67 aa16.26■□□□□ 0.19
TOM1L1-221ENST00000575882 QPRTQ15274 297 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms