RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 A0A1W2PRQ8 180 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 PLA2G10O15496 165 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 SEC14L5O43304 696 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 TSPAN19P0C672 248 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 TRAPPC2P0DI81 140 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 TRAPPC2BP0DI82 140 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 LAG3P18627 525 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 SLC9A3P48764 834 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 TEAD2Q15562 447 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 SLC25A30Q5SVS4 291 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 RAET1GQ6H3X3 334 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 LAPTM4BQ86VI4 370 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 IQCHQ86VS3 1027 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 GDPD1Q8N9F7 314 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 XAGE5Q8WWM1 108 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 C1GALT1C1Q96EU7 318 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 OTUB1Q96FW1 271 aaPredicted RBP18.02■□□□□ 0.48
SCARF1-206ENST00000573852 KATNB1Q9BVA0 655 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 CTPS2Q9NRF8 586 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 CUEDC1Q9NWM3 386 aaPredicted RBP18.02■□□□□ 0.48
SCARF1-206ENST00000573852 FBXW2Q9UKT8 454 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 WNT6Q9Y6F9 365 aa18.02■□□□□ 0.48
SCARF1-206ENST00000573852 FEZF1A0PJY2 475 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 POLR1CO15160 346 aaPredicted RBP18.02■□□□□ 0.47
SCARF1-206ENST00000573852 TBX19O60806 448 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 PAPLNO95428 1278 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 MYCP01106 439 aaPredicted RBP18.02■□□□□ 0.47
SCARF1-206ENST00000573852 GPC1P35052 558 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 FRKP42685 505 aaPredicted RBP18.02■□□□□ 0.47
SCARF1-206ENST00000573852 KIR2DL3P43628 341 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 CAV3P56539 151 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 DMPKQ09013 629 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.02■□□□□ 0.47
SCARF1-206ENST00000573852 PYDC2Q56P42 97 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 CD300LDQ6UXZ3 194 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 VWA5B2Q8N398 1253 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 CAMKK1Q8N5S9 505 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 KREMEN2Q8NCW0 462 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 GATAD2BQ8WXI9 593 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 PPP1R16AQ96I34 528 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 KCTD7Q96MP8 289 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 TM9SF2Q99805 663 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 TEX10Q9NXF1 929 aaPredicted RBP18.02■□□□□ 0.47
SCARF1-206ENST00000573852 TAC3Q9UHF0 121 aa18.02■□□□□ 0.47
SCARF1-206ENST00000573852 SF3B6Q9Y3B4 125 aaKnown RBP18.02■□□□□ 0.47
SCARF1-206ENST00000573852 CENPBD1B2RD01 187 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 TMPRSS11DO60235 418 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 EPPINO95925 133 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 MYL9P24844 172 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 GPR1P46091 355 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 WNT4P56705 351 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 CDK5Q00535 292 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 COX10Q12887 443 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 PLK5Q496M5 336 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 GPAT3Q53EU6 434 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 Q5BKY6 102 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 DDI2Q5TDH0 399 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 HSDL2Q6YN16 418 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 SZRD1Q7Z422 152 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 RASSF5Q8WWW0 418 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 FNDC11Q9BVV2 318 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 PLA2G12AQ9BZM1 189 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 ZCCHC2Q9C0B9 1178 aaKnown RBP18.01■□□□□ 0.47
SCARF1-206ENST00000573852 RHBGQ9H310 441 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 OR51I1Q9H343 314 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 TDP1Q9NUW8 608 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 HCFC2Q9Y5Z7 792 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 CACNB4O00305 520 aaPredicted RBP18.01■□□□□ 0.47
SCARF1-206ENST00000573852 NDUFB5O43674 189 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 SNAPC1Q16533 368 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 CRTC2Q53ET0 693 aaPredicted RBP18.01■□□□□ 0.47
SCARF1-206ENST00000573852 C3orf38Q5JPI3 329 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 KIF18BQ86Y91 864 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 TRIM48Q8IWZ4 208 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 AMER3Q8N944 861 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 MORN4Q8NDC4 146 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 TOR4AQ9NXH8 423 aa18.01■□□□□ 0.47
SCARF1-206ENST00000573852 TCF20Q9UGU0 1960 aaKnown RBP18■□□□□ 0.47
SCARF1-206ENST00000573852 WASHC1A8K0Z3 465 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 WASH2PQ6VEQ5 465 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 NOXA1Q86UR1 476 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 PDZD3Q86UT5 571 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 SIMC1Q8NDZ2 872 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 OR6T1Q8NGN1 323 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 OR52P1PQ8NH57 321 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 LRIG1Q96JA1 1093 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 ZBP1Q9H171 429 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 OR52A5Q9H2C5 316 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 TMEM245Q9H330 911 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 RNF121Q9H920 327 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 STK25O00506 426 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 MOSPD3O75425 235 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 ALPPP05187 535 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 RB1P06400 928 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 NR2F1P10589 423 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 MYL12AP19105 171 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 CNKSR3Q6P9H4 555 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 ZNF438Q7Z4V0 828 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 C17orf64Q86WR6 236 aa18■□□□□ 0.47
SCARF1-206ENST00000573852 OR2L2Q8NH16 312 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms