RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 NATD1Q8N6N6 113 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 GALNT11Q8NCW6 608 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 OR7G1Q8NGA0 311 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 CLHC1Q8NHS4 586 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 ACTRT2Q8TDY3 377 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 ZNF721Q8TF20 911 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 ERP27Q96DN0 273 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 ZNF681Q96N22 645 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 NPAS2Q99743 824 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 BRINP2Q9C0B6 783 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 ATAD3AQ9NVI7 634 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 SH3BP4Q9P0V3 963 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 VPS4AQ9UN37 437 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 ERVK-19Q9WJR5 959 aa12.58□□□□□ -0.4
RPAIN-213ENST00000573577 COPG1Q9Y678 874 aaKnown RBP12.58□□□□□ -0.4
RPAIN-213ENST00000573577 TRAV17A0A0B4J275 112 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 A0A1W2PS29 197 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 OR6C76A6NM76 312 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 SCAMP2O15127 329 aaKnown RBP12.57□□□□□ -0.4
RPAIN-213ENST00000573577 PDPK1O15530 556 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 MAN1A2O60476 641 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 DIAPH2O60879 1101 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 BCAS2O75934 225 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-213ENST00000573577 IGKV3-11P04433 115 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 G6PDP11413 515 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 EPHA3P29320 983 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 MAP4K2Q12851 820 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 PDE7AQ13946 482 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 PTGR1Q14914 329 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 ZNF750Q32MQ0 723 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 RNF111Q6ZNA4 994 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 DGAT2L6Q6ZPD8 337 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 SLC29A4Q7RTT9 530 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 CCDC116Q8IYX3 515 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 CEP70Q8NHQ1 597 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 ZFP28Q8NHY6 868 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 ZNF675Q8TD23 568 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 ZBED6CLQ96FA7 236 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-213ENST00000573577 MAELQ96JY0 434 aaKnown RBP12.57□□□□□ -0.4
RPAIN-213ENST00000573577 SIKE1Q9BRV8 207 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.57□□□□□ -0.4
RPAIN-213ENST00000573577 CDCP1Q9H5V8 836 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 ASF1BQ9NVP2 202 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 CFL2Q9Y281 166 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 NTNG1Q9Y2I2 539 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 CNTRLQ7Z7A1 2325 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 CPAMD8Q8IZJ3 1885 aa12.57□□□□□ -0.4
RPAIN-213ENST00000573577 NBASA2RRP1 2371 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 GOLGA8QA0A0J9YX86 632 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 GOLGA8OA6NCC3 632 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 GABRR3A8MPY1 467 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 MYO1GB0I1T2 1018 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 TCP11X1B4DZS4 312 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 GOLGA8NF8WBI6 632 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 NCBP2P52298 156 aaKnown RBP eCLIP12.56□□□□□ -0.43e-8■■□□□ 11.6
RPAIN-213ENST00000573577 CLDN8P56748 225 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 MLF1P58340 268 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 C21orf58P58505 322 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 RNF4P78317 190 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 FUT7Q11130 342 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 PRICKLE4Q2TBC4 344 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 CPTPQ5TA50 214 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 RPUSD3Q6P087 351 aaKnown RBP12.56□□□□□ -0.4
RPAIN-213ENST00000573577 FAM180BQ6P0A1 224 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 EPGNQ6UW88 154 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 ARMC10Q8N2F6 343 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 SUN3Q8TAQ9 357 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 NUBPLQ8TB37 319 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 BARD1Q99728 777 aaKnown RBP12.56□□□□□ -0.4
RPAIN-213ENST00000573577 UTP23Q9BRU9 249 aaKnown RBP12.56□□□□□ -0.4
RPAIN-213ENST00000573577 DPY30Q9C005 99 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 OR10A5Q9H207 317 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 WDR55Q9H6Y2 383 aaPredicted RBP12.56□□□□□ -0.4
RPAIN-213ENST00000573577 MAT2BQ9NZL9 334 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 ATP6V1HQ9UI12 483 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 ZNF223Q9UK11 482 aaPredicted RBP12.56□□□□□ -0.4
RPAIN-213ENST00000573577 EXO1Q9UQ84 846 aaKnown RBP12.56□□□□□ -0.4
RPAIN-213ENST00000573577 RELNP78509 3460 aa12.56□□□□□ -0.4
RPAIN-213ENST00000573577 PRRC2CQ9Y520 2896 aaKnown RBP12.55□□□□□ -0.4
RPAIN-213ENST00000573577 ZNF195O14628 629 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 POLR3GO15318 223 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-213ENST00000573577 PRAMEF2O60811 474 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 EDF1O60869 148 aaKnown RBP12.55□□□□□ -0.4
RPAIN-213ENST00000573577 IDO1P14902 403 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 GNLYP22749 145 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 UQCRFS1P47985 274 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 CLNS1AP54105 237 aaKnown RBP12.55□□□□□ -0.4
RPAIN-213ENST00000573577 DIO3P55073 304 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 SLC37A1P57057 533 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 TUBA3CQ13748 450 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 RPS6KA2Q15349 733 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 INAQ16352 499 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 DPY19L1Q2PZI1 675 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 SLC9B1Q4ZJI4 515 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 ZNF628Q5EBL2 1059 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 HLA-DQA1Q5Y7H0 255 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 TUBA3EQ6PEY2 450 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 MAVSQ7Z434 540 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 HORMAD2Q8N7B1 307 aa12.55□□□□□ -0.4
RPAIN-213ENST00000573577 ZNF321PQ8N8H1 164 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms