RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 IL3P08700 152 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 CCL3P10147 92 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 PORP16435 677 aaPredicted RBP13.44□□□□□ -0.26
LITAF-208ENST00000571627 TIA1P31483 386 aaKnown RBP eCLIP13.44□□□□□ -0.26
LITAF-208ENST00000571627 GALNSP34059 522 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 NR0B1P51843 470 aaKnown RBP13.44□□□□□ -0.26
LITAF-208ENST00000571627 PER3P56645 1201 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 KRTCAP3Q53RY4 240 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 ARL13AQ5H913 290 aaPredicted RBP13.44□□□□□ -0.26
LITAF-208ENST00000571627 KANK2Q63ZY3 851 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 CRYBG3Q68DQ2 2970 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 CLEC6AQ6EIG7 209 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 GALNT18Q6P9A2 607 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 FAM111BQ6SJ93 734 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 LYPD8Q6UX82 237 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 TMEM64Q6YI46 380 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 CLYBLQ8N0X4 340 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 ZFP62Q8NB50 900 aaPredicted RBP13.44□□□□□ -0.26
LITAF-208ENST00000571627 POGLUT1Q8NBL1 392 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 OR2M7Q8NG81 312 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 OR6Y1Q8NGX8 325 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 FAM76AQ8TAV0 307 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 SLC22A8Q8TCC7 542 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 MAGED4Q96JG8 741 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 PKNOX2Q96KN3 472 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 TMBIM4Q9HC24 238 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 TINAGQ9UJW2 476 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 DLGAP4Q9Y2H0 992 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 TRAF6Q9Y4K3 522 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 NINQ8N4C6 2090 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 DNAJC13O75165 2243 aa13.44□□□□□ -0.26
LITAF-208ENST00000571627 A0A1B0GUH1 482 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 FAM166BA8MTA8 275 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 CCL21O00585 134 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 RGS14O43566 566 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 CDC40O60508 579 aaKnown RBP eCLIP13.43□□□□□ -0.26
LITAF-208ENST00000571627 SNUPNO95149 360 aaKnown RBP13.43□□□□□ -0.26
LITAF-208ENST00000571627 LRATO95237 230 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 CHRNGP07510 517 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 DHRS4L1P0CG22 281 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 NEFHP12036 1026 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 DRD2P14416 443 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 COL8A1P27658 744 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 CA7P43166 264 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 DNASE1L1P49184 302 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 FUT7Q11130 342 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 EXOSC7Q15024 291 aaKnown RBP13.43□□□□□ -0.26
LITAF-208ENST00000571627 LTB4RQ15722 352 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 C3AR1Q16581 482 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 ZNF791Q3KP31 576 aaPredicted RBP13.43□□□□□ -0.26
LITAF-208ENST00000571627 C6orf163Q5TEZ5 329 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 ZCCHC23Q6ZST2 131 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 FGD2Q7Z6J4 655 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 CHERPQ8IWX8 916 aaKnown RBP13.43□□□□□ -0.26
LITAF-208ENST00000571627 SIMC1Q8NDZ2 872 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 ADCY4Q8NFM4 1077 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 OR5M3Q8NGP4 307 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 CDC26Q8NHZ8 85 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 C16orf78Q8WTQ4 265 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 RELTQ969Z4 430 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 ZBTB9Q96C00 473 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 C11orf24Q96F05 449 aaPredicted RBP13.43□□□□□ -0.26
LITAF-208ENST00000571627 CNRIP1Q96F85 164 aaPredicted RBP13.43□□□□□ -0.26
LITAF-208ENST00000571627 BRINP2Q9C0B6 783 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 WBP11Q9Y2W2 641 aaKnown RBP13.43□□□□□ -0.26
LITAF-208ENST00000571627 FIS1Q9Y3D6 152 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 PTGDR2Q9Y5Y4 395 aa13.43□□□□□ -0.26
LITAF-208ENST00000571627 NBPF19A0A087WUL8 3843 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 C2orf92A0A1B0GVN3 265 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 OR6C76A6NM76 312 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 TMEM114B3SHH9 223 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 NPIPB8E9PQR5 432 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 SERPINE1P05121 402 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 ANXA4P09525 319 aaPredicted RBP13.42□□□□□ -0.26
LITAF-208ENST00000571627 FBXO45P0C2W1 286 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 CSNK2A2P19784 350 aaPredicted RBP13.42□□□□□ -0.26
LITAF-208ENST00000571627 S1PR1P21453 382 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 PRPH2P23942 346 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 GRK2P25098 689 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 PIGAP37287 484 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 SLC18A1P54219 525 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 PLGLB1Q02325 96 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 MGAT2Q10469 447 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 DUSP8Q13202 625 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 HEPACAMQ14CZ8 416 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 PRICKLE4Q2TBC4 344 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 CMPK2Q5EBM0 449 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 SH2D4BQ5SQS7 431 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 PRAMEF20Q5VT98 475 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 HHATQ5VTY9 493 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 FAM47EQ6ZV65 393 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 MAMDC2Q7Z304 686 aaPredicted RBP13.42□□□□□ -0.26
LITAF-208ENST00000571627 SPPL2CQ8IUH8 684 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 GHDCQ8N2G8 530 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 VWA5B2Q8N398 1253 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 ZNF615Q8N8J6 731 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 ZNF441Q8N8Z8 693 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 GOLM1Q8NBJ4 401 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 FAM13CQ8NE31 585 aa13.42□□□□□ -0.26
LITAF-208ENST00000571627 OR52N2Q8NGI0 321 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms