RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 GSTM5P46439 218 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 DNASE1L1P49184 302 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 ALDH9A1P49189 494 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 NR0B1P51843 470 aaKnown RBP18.7■□□□□ 0.58
CLK3-225ENST00000569063 ADORA2A-AS1P86434 159 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 NTRK2Q16620 822 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 LIPMQ5VYY2 423 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 HLA-DQA1Q5Y7H0 255 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 ARHGAP11AQ6P4F7 1023 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 EMBQ6PCB8 327 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 XKRXQ6PP77 449 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 PAOXQ6QHF9 649 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 SCIMPQ6UWF3 145 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 TRIM46Q7Z4K8 759 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 FBXW8Q8N3Y1 598 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 CCDC63Q8NA47 563 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 FAM57AQ8TBR7 257 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 CTHRC1Q96CG8 243 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 PHF12Q96QT6 1004 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 DEFB127Q9H1M4 99 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 MAT2BQ9NZL9 334 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 MID2Q9UJV3 735 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 UTS2RQ9UKP6 389 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 DLGAP4Q9Y2H0 992 aa18.7■□□□□ 0.58
CLK3-225ENST00000569063 CHCHD2Q9Y6H1 151 aaPredicted RBP18.7■□□□□ 0.58
CLK3-225ENST00000569063 DIDO1Q9BTC0 2240 aaKnown RBP18.69■□□□□ 0.58
CLK3-225ENST00000569063 FAM166BA8MTA8 275 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 E9PLN8 166 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 IL3P08700 152 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 SOX18P35713 384 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 PIGAP37287 484 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 DUSP2Q05923 314 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 HEPACAMQ14CZ8 416 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 ZNF787Q6DD87 383 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 TRABD2AQ86V40 505 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 SLC34A3Q8N130 599 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 LRRC25Q8N386 305 aaPredicted RBP18.69■□□□□ 0.58
CLK3-225ENST00000569063 FAM109AQ8N4B1 249 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 FAM13CQ8NE31 585 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 OR10G3Q8NGC4 313 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 C16orf78Q8WTQ4 265 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 CAVIN3Q969G5 261 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 VKORC1Q9BQB6 163 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 ROPN1BQ9BZX4 212 aaPredicted RBP18.69■□□□□ 0.58
CLK3-225ENST00000569063 BRINP2Q9C0B6 783 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 ROPN1Q9HAT0 212 aaPredicted RBP18.69■□□□□ 0.58
CLK3-225ENST00000569063 TUBA8Q9NY65 449 aaPredicted RBP18.69■□□□□ 0.58
CLK3-225ENST00000569063 LGALS13Q9UHV8 139 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 PLLPQ9Y342 182 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 KLF2Q9Y5W3 355 aaPredicted RBP18.69■□□□□ 0.58
CLK3-225ENST00000569063 NPFFR2Q9Y5X5 522 aa18.69■□□□□ 0.58
CLK3-225ENST00000569063 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.69■□□□□ 0.58
CLK3-225ENST00000569063 MYO7BQ6PIF6 2116 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 CAPN14A8MX76 684 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 ADAM10O14672 748 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 PDE9AO76083 593 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 IGHG3P01860 377 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 GPX3P22352 226 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 SMSP52788 366 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 BTKQ06187 659 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 FAM111BQ6SJ93 734 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 C10orf107Q8IVU9 208 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 SAMD14Q8IZD0 417 aaPredicted RBP18.68■□□□□ 0.58
CLK3-225ENST00000569063 EID3Q8N140 333 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 TMEM251Q8N6I4 163 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 BANPQ8N9N5 519 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 PHF10Q8WUB8 498 aaKnown RBP18.68■□□□□ 0.58
CLK3-225ENST00000569063 APOPT1Q96IL0 206 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 PROK2Q9HC23 129 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 TNFRSF12AQ9NP84 129 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 EHD3Q9NZN3 535 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 CNOT11Q9UKZ1 510 aaKnown RBP18.68■□□□□ 0.58
CLK3-225ENST00000569063 CFL2Q9Y281 166 aa18.68■□□□□ 0.58
CLK3-225ENST00000569063 ANKRD33BA6NCL7 494 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 TRIM13O60858 407 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 CRCPO75575 148 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 ANXA4P09525 319 aaPredicted RBP18.67■□□□□ 0.58
CLK3-225ENST00000569063 UROSP10746 265 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 MAGEA5P43359 124 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 NRG3P56975 720 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 IFFO1Q0D2I5 559 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 PCLAFQ15004 111 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 SPDYAQ5MJ70 313 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 PRAMEF20Q5VT98 475 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 FAM180BQ6P0A1 224 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 ADCY4Q8NFM4 1077 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 FAM76AQ8TAV0 307 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 DMRTA2Q96SC8 542 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 EBPLQ9BY08 206 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 SHCBP1LQ9BZQ2 653 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 IQCGQ9H095 443 aaKnown RBP18.67■□□□□ 0.58
CLK3-225ENST00000569063 DTX4Q9Y2E6 619 aa18.67■□□□□ 0.58
CLK3-225ENST00000569063 EML6Q6ZMW3 1958 aa18.66■□□□□ 0.58
CLK3-225ENST00000569063 A0A1B0GVC2 190 aa18.66■□□□□ 0.58
CLK3-225ENST00000569063 OR14I1A6ND48 311 aa18.66■□□□□ 0.58
CLK3-225ENST00000569063 PRSS44E7EML9 344 aa18.66■□□□□ 0.58
CLK3-225ENST00000569063 TP53I11O14683 189 aa18.66■□□□□ 0.58
CLK3-225ENST00000569063 RSL1D1O76021 490 aaKnown RBP18.66■□□□□ 0.58
CLK3-225ENST00000569063 TPOP07202 933 aa18.66■□□□□ 0.58
CLK3-225ENST00000569063 TMED10P49755 219 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms