RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 FAM72BQ86X60 149 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 MFSD6LQ8IWD5 586 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 AQP12AQ8IXF9 295 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 C1orf52Q8N6N3 182 aaKnown RBP3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 CLEC1AQ8NC01 280 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 CCNYQ8ND76 341 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 OR10V1Q8NGI7 309 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 RPLP0P6Q8NHW5 317 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 ZNF461Q8TAF7 563 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 TBCKQ8TEA7 893 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 RLN3Q8WXF3 142 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 SHC3Q92529 594 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 SMARCD2Q92925 531 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 SLAMF9Q96A28 289 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 RAB7BQ96AH8 199 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 TMEM186Q96B77 213 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 AP2M1Q96CW1 435 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 DTNBP1Q96EV8 351 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 STAMBPL1Q96FJ0 436 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 DTD2Q96FN9 168 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 EEF2KMTQ96G04 330 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 ZNF560Q96MR9 790 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 OR6C1Q96RD1 312 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 F2RL3Q96RI0 385 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 SEPHS2Q99611 448 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 TXN2Q99757 166 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 LSG1Q9H089 658 aaKnown RBP3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 WNT5BQ9H1J7 359 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 CARD9Q9H257 536 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 SEMA6AQ9H2E6 1030 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 DPAGT1Q9H3H5 408 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 C6orf50Q9HD87 102 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 NGBQ9NPG2 151 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 TMEM9BQ9NQ34 198 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 XPNPEP1Q9NQW7 623 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 GKN1Q9NS71 199 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 FAM118AQ9NWS6 357 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 OSER1Q9NX31 292 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 RCC2Q9P258 522 aaKnown RBP3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 RHCGQ9UBD6 479 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 LAMP5Q9UJQ1 280 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 GPR179Q6PRD1 2367 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 MYH10P35580 1976 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 DMXL2Q8TDJ6 3036 aa3.03□□□□□ -1.92
HMGB1P6-201ENST00000569046 COL5A1P20908 1838 aaPredicted RBP3.03□□□□□ -1.93
HMGB1P6-201ENST00000569046 TPRP12270 2363 aaKnown RBP3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 PCDH15Q96QU1 1955 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 IGSF10Q6WRI0 2623 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 TRBV2A0A0J9YWF9 115 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 C13orf42A0A1B0GVH6 325 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 C2orf92A0A1B0GVN3 265 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 A0A1W2PPI3 338 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 BCLAF3A2AJT9 711 aaKnown RBP3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 MYBPHLA2RUH7 354 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 FAM149AA5PLN7 773 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 LRRIQ4A6NIV6 560 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 DUXAA6NLW8 204 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 RASGRF2O14827 1237 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 MCF2LO15068 1137 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 OR10H2O60403 315 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 PRAMEF12O95522 483 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 SERPING1P05155 500 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 ANKRD34CP0C6C1 535 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 PATE4P0C8F1 98 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 TPBGLP0DKB5 382 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 CEACAM1P13688 526 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 AREGP15514 252 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 GLRA2P23416 452 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 YWHABP31946 246 aaKnown RBP3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 PTGER3P43115 390 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 MAGEA4P43358 317 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 MAGEB1P43366 347 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 QARSP47897 775 aaKnown RBP3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 PITPNBP48739 271 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 MMP15P51511 669 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 MLLT10P55197 1068 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 PSMC5P62195 406 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 SNRPEP62304 92 aaKnown RBP3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 PMP22Q01453 160 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 NCBP1Q09161 790 aaKnown RBP3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 ELP6Q0PNE2 266 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 KIR2DS3Q14952 304 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 NECTIN1Q15223 517 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 CEBPEQ15744 281 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 SLC35E4Q6ICL7 350 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 OR6B2Q6IFH4 312 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 PRR27Q6MZM9 219 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 ENPP7Q6UWV6 458 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 CEACAM20Q6UY09 585 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 RBM43Q6ZSC3 357 aaKnown RBP3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 LPCAT2Q7L5N7 544 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 PRSS42Q7Z5A4 293 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 ADAMTSL2Q86TH1 951 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 AMER3Q8N944 861 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 L3MBTL4Q8NA19 623 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 DENND6BQ8NEG7 585 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 TRIM58Q8NG06 486 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 ATL1Q8WXF7 558 aa3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 C18orf25Q96B23 403 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P6-201ENST00000569046 SGF29Q96ES7 293 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms