RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 FAM71E1Q6IPT2 247 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 PGBD2Q6P3X8 592 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 LYPD8Q6UX82 237 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 ZNF730Q6ZMV8 503 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 TRIM69Q86WT6 500 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 MARCH9Q86YJ5 346 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 TCEAL8Q8IYN2 117 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 KIAA1958Q8N8K9 716 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 ASCC1Q8N9N2 400 aaKnown RBP8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 OR56A3Q8NH54 315 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 PXYLP1Q8TE99 480 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 CRELD1Q96HD1 420 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 SLC6A18Q96N87 628 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 FERD3LQ96RJ6 166 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 EFCAB11Q9BUY7 163 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 CREBZFQ9NS37 354 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 TXNL4BQ9NX01 149 aaKnown RBP8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 KCNE3Q9Y6H6 103 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 EYSQ5T1H1 3165 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 CNTRLQ7Z7A1 2325 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 FAM240BA0A1B0GVZ2 78 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 ISM1B1AKI9 464 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 STK25O00506 426 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 NPC1O15118 1278 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 FCER2P06734 321 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 NR2F6P10588 404 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 MYL9P24844 172 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 SOX9P48436 509 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 PRLHRP49683 370 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 SCN1BQ07699 218 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 LARS2Q15031 903 aaKnown RBP8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 QPRTQ15274 297 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 ZNF805Q5CZA5 627 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 C9orf64Q5T6V5 341 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 PLET1Q6UQ28 207 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 UNC5DQ6UXZ4 953 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 MSANTD1Q6ZTZ1 278 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 CCDC190Q86UF4 302 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 VRK2Q86Y07 508 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 PHC2Q8IXK0 858 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 ZNF557Q8N988 423 aaPredicted RBP8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 ANKRD53Q8N9V6 530 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 BBS1Q8NFJ9 593 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 OR6F1Q8NGZ6 308 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 VOPP1Q96AW1 172 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 SIGLEC11Q96RL6 698 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 LYSMD1Q96S90 227 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 BCL7BQ9BQE9 202 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 MND1Q9BWT6 205 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 CCDC59Q9P031 241 aaKnown RBP8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 PLEKHM1Q9Y4G2 1056 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 GBF1Q92538 1859 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 NPIPA5A0A0B4J1W7 369 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 FAM170BA6NMN3 283 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 NPIPA7E9PJI5 369 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 SLC16A5O15375 505 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 HOXC11O43248 304 aaPredicted RBP8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 ERI3O43414 337 aaKnown RBP8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 AKR7A2O43488 359 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 RECKO95980 971 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 NPIPA8P0DM63 369 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 SLC2A2P11168 524 aaPredicted RBP8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 S100A1P23297 94 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 PLXNA3P51805 1871 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 STXBP1P61764 594 aaKnown RBP8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 SCN5AQ14524 2016 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 IDNKQ5T6J7 187 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 ZER1Q7Z7L7 766 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 KRT78Q8N1N4 520 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 OR51G2Q8NGK0 314 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 OR52I1Q8NGK6 324 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 ZCCHC10Q8TBK6 192 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 TEX47Q8TBZ9 253 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 SMPDL3AQ92484 453 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 TMCO6Q96DC7 493 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 LGR4Q9BXB1 951 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 CERS4Q9HA82 394 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 BRF2Q9HAW0 419 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 STOML2Q9UJZ1 356 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 NDRG2Q9UN36 371 aaKnown RBP8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 STUB1Q9UNE7 303 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 SNX7Q9UNH6 387 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 RPL36Q9Y3U8 105 aaKnown RBP8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 F5P12259 2224 aa8.48□□□□□ -1.05
HDGFL3-206ENST00000568294 SCN3AQ9NY46 2000 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 TRAV6A0A075B6T7 132 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 ZNF860A6NHJ4 632 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 RHOP08100 348 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 GNSP15586 552 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 UQCRC2P22695 453 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 PRPH2P23942 346 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 PPP2R1BP30154 601 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 CTBP2P56545 445 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 LTB4RQ15722 352 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 FAM27D1Q5T7N8 215 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 PIP5KL1Q5T9C9 394 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 VN1R5Q7Z5H4 357 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 SLC9B2Q86UD5 537 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 KLBQ86Z14 1044 aa8.47□□□□□ -1.05
HDGFL3-206ENST00000568294 ZNF547Q8IVP9 402 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms